RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.91□□□□□ -1.46
SSBP1-211ENST00000484178 TRBV23OR9-2A0A075B6M9 112 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 MARCH6O60337 910 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 SARSP49591 514 aaKnown RBP5.91□□□□□ -1.46
SSBP1-211ENST00000484178 ADAM17P78536 824 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 CKAP2LQ8IYA6 745 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 C19orf47Q8N9M1 422 aaKnown RBP5.91□□□□□ -1.46
SSBP1-211ENST00000484178 SMARCC2Q8TAQ2 1214 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 MICAL1Q8TDZ2 1067 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 RCC1LQ96I51 464 aaKnown RBP5.91□□□□□ -1.46
SSBP1-211ENST00000484178 ZDHHC15Q96MV8 337 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 HAUS7Q99871 368 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 MCMBPQ9BTE3 642 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 MYH16Q9H6N6 1097 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.91□□□□□ -1.46
SSBP1-211ENST00000484178 FBLN5Q9UBX5 448 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
SSBP1-211ENST00000484178 SETBP1Q9Y6X0 1596 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 KIF16BQ96L93 1317 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 DEPDC5O75140 1603 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 TET3O43151 1660 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 KDM5AP29375 1690 aaKnown RBP5.91□□□□□ -1.46
SSBP1-211ENST00000484178 SPHKAPQ2M3C7 1700 aa5.91□□□□□ -1.46
SSBP1-211ENST00000484178 LMTK2Q8IWU2 1503 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 VWDEQ8N2E2 1590 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 PPP1R11O60927 126 aaPredicted RBP5.9□□□□□ -1.46
SSBP1-211ENST00000484178 CNR2P34972 360 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 IGBP1P78318 339 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 GRB10Q13322 594 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 PUM1Q14671 1186 aaKnown RBP eCLIP5.9□□□□□ -1.46
SSBP1-211ENST00000484178 RGL3Q3MIN7 710 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 RUFY4Q6ZNE9 571 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 TTLL7Q6ZT98 887 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 ARHGEF39Q8N4T4 335 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 MKL1Q969V6 931 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 MRFAP1L1Q96HT8 127 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 NOX5Q96PH1 765 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 PHAXQ9H814 394 aaKnown RBP5.9□□□□□ -1.46
SSBP1-211ENST00000484178 SMPD4Q9NXE4 827 aa5.9□□□□□ -1.46
SSBP1-211ENST00000484178 SPAG9O60271 1321 aaKnown RBP5.9□□□□□ -1.47
SSBP1-211ENST00000484178 ABCC11Q96J66 1382 aa5.9□□□□□ -1.47
SSBP1-211ENST00000484178 PLEKHH1Q9ULM0 1364 aa5.9□□□□□ -1.47
SSBP1-211ENST00000484178 NRXN1Q9ULB1 1477 aa5.9□□□□□ -1.47
SSBP1-211ENST00000484178 MYO3AQ8NEV4 1616 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 USP32Q8NFA0 1604 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 CEP152O94986 1710 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 hCG_2014768A0A024R1R8 64 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 ENPP3O14638 875 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 TNFRSF1AP19438 455 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 RUNDC1Q96C34 613 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 SEC16BQ96JE7 1060 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 SAMD11Q96NU1 681 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 PPT2Q9UMR5 302 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 LAS1LQ9Y4W2 734 aaKnown RBP5.89□□□□□ -1.47
SSBP1-211ENST00000484178 BACE2Q9Y5Z0 518 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 IL16Q14005 1332 aa5.89□□□□□ -1.47
SSBP1-211ENST00000484178 C2orf71A6NGG8 1288 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 CLSTN1O94985 981 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 SEPHS1P49903 392 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 PPP2R5DQ14738 602 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 GLIPR1L2Q4G1C9 344 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 WWC2Q6AWC2 1192 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
SSBP1-211ENST00000484178 ADAMTS17Q8TE56 1095 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 ZBTB8AQ96BR9 441 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 METTL14Q9HCE5 456 aaKnown RBP5.88□□□□□ -1.47
SSBP1-211ENST00000484178 RWDD3Q9Y3V2 267 aa5.88□□□□□ -1.47
SSBP1-211ENST00000484178 IPO8O15397 1037 aaKnown RBP5.87□□□□□ -1.47
SSBP1-211ENST00000484178 PPM1BO75688 479 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 PLATP00750 562 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 PAMP19021 973 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 RPL13P26373 211 aaKnown RBP5.87□□□□□ -1.47
SSBP1-211ENST00000484178 AMPD2Q01433 879 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 GNPTABQ3T906 1256 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 RNF187Q5TA31 235 aaPredicted RBP5.87□□□□□ -1.47
SSBP1-211ENST00000484178 FBXW10Q5XX13 1052 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 CPZQ66K79 652 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 HEATR6Q6AI08 1181 aaKnown RBP5.87□□□□□ -1.47
SSBP1-211ENST00000484178 ZCRB1Q8TBF4 217 aaKnown RBP5.87□□□□□ -1.47
SSBP1-211ENST00000484178 DDX1Q92499 740 aaKnown RBP5.87□□□□□ -1.47
SSBP1-211ENST00000484178 ZNF408Q9H9D4 720 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 FAM86C1Q9NVL1 165 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 CGGBP1Q9UFW8 167 aaPredicted RBP5.87□□□□□ -1.47
SSBP1-211ENST00000484178 ZFYVE16Q7Z3T8 1539 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 REREQ9P2R6 1566 aa5.87□□□□□ -1.47
SSBP1-211ENST00000484178 MAP3K4Q9Y6R4 1608 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 C7orf72A4D263 438 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 STXBP3O00186 592 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 APAF1O14727 1248 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 PLIN1O60240 522 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 CYP2C8P10632 490 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 IBSPP21815 317 aaPredicted RBP5.86□□□□□ -1.47
SSBP1-211ENST00000484178 SOX9P48436 509 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 GIPRP48546 466 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 CALD1Q05682 793 aaKnown RBP5.86□□□□□ -1.47
SSBP1-211ENST00000484178 KIAA2012Q0VF49 1180 aa5.86□□□□□ -1.47
SSBP1-211ENST00000484178 HDAC1Q13547 482 aaPredicted RBP5.86□□□□□ -1.47
SSBP1-211ENST00000484178 FAM26FQ5R3K3 315 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms