RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 SYKP43405 635 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 CTCFP49711 727 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-225ENST00000481502 ITGB3BPQ13352 177 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-225ENST00000481502 IL17AQ16552 155 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 MIS18BP1Q6P0N0 1132 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 PLPPR4Q7Z2D5 763 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 MIER3Q7Z3K6 550 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 DHX37Q8IY37 1157 aaKnown RBP9.27□□□□□ -0.93
SYNE1-225ENST00000481502 C4orf19Q8IY42 314 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 ENGASEQ8NFI3 743 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 PPTC7Q8NI37 304 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 AFAP1L1Q8TED9 768 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 SEPT1Q8WYJ6 367 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 GTPBP4Q9BZE4 634 aaKnown RBP9.27□□□□□ -0.93
SYNE1-225ENST00000481502 ARHGAP39Q9C0H5 1083 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 ZSWIM4Q9H7M6 989 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 MLXIPQ9HAP2 919 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 DISC1Q9NRI5 854 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 DDX19AQ9NUU7 478 aaKnown RBP9.27□□□□□ -0.93
SYNE1-225ENST00000481502 KCND2Q9NZV8 630 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 KCNH3Q9ULD8 1083 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 GABRQQ9UN88 632 aa9.27□□□□□ -0.93
SYNE1-225ENST00000481502 A6NJR5 290 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 HAX1O00165 279 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 CTAGE5O15320 804 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 DUSP11O75319 330 aaKnown RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 LGR5O75473 907 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 SLITRK3O94933 977 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 SLFN14P0C7P3 912 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 CYBAP13498 195 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 PFKFB1P16118 471 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 GRK4P32298 578 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 QARSP47897 775 aaKnown RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 PSMC5P62195 406 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 AMPD3Q01432 767 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 TNFAIP2Q03169 654 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 CCDC144BQ3MJ40 725 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 FAM160B1Q5W0V3 765 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 ABHD15Q6UXT9 468 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 CABP7Q86V35 215 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 FBXO16Q8IX29 292 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 EXOC8Q8IYI6 725 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 TRIB2Q92519 343 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 ATP6V0A1Q93050 837 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 CDK5RAP3Q96JB5 506 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 CLIC6Q96NY7 704 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 NACC1Q96RE7 527 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 EIF2AK1Q9BQI3 630 aaKnown RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 SEZ6LQ9BYH1 1024 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 UNC45AQ9H3U1 944 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 SPC25Q9HBM1 224 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 FLRT1Q9NZU1 646 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 GNEQ9Y223 722 aaKnown RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 PTPN22Q9Y2R2 807 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 DDX49Q9Y6V7 483 aaKnown RBP9.26□□□□□ -0.93
SYNE1-225ENST00000481502 KIAA1217Q5T5P2 1943 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 EMSYQ7Z589 1322 aa9.26□□□□□ -0.93
SYNE1-225ENST00000481502 LRRC37A2A6NM11 1700 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 ZEB2O60315 1214 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 KINO60870 393 aaKnown RBP9.25□□□□□ -0.93
SYNE1-225ENST00000481502 ZNF202O95125 648 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 GGPS1O95749 300 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 CPT1AP50416 773 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 ACTR2P61160 394 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 SP2Q02086 613 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 ARHGAP1Q07960 439 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 SNW1Q13573 536 aaKnown RBP9.25□□□□□ -0.93
SYNE1-225ENST00000481502 TMEM119Q4V9L6 283 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 CNNM4Q6P4Q7 775 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 CYFIP1Q7L576 1253 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 OTUD6AQ7L8S5 288 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 CTU1Q7Z7A3 348 aaKnown RBP9.25□□□□□ -0.93
SYNE1-225ENST00000481502 CATSPER3Q86XQ3 398 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 FSIP1Q8NA03 581 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 EPSTI1Q96J88 318 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 CHAMP1Q96JM3 812 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 FAM167AQ96KS9 214 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 MMTAG2Q9BU76 263 aaKnown RBP9.25□□□□□ -0.93
SYNE1-225ENST00000481502 TNMDQ9H2S6 317 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 SMARCAD1Q9H4L7 1026 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 ANKEF1Q9NU02 776 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 KCNG1Q9UIX4 513 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 DBR1Q9UK59 544 aaKnown RBP9.25□□□□□ -0.93
SYNE1-225ENST00000481502 DNM3Q9UQ16 869 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 TRIM17Q9Y577 477 aa9.25□□□□□ -0.93
SYNE1-225ENST00000481502 A0A1B0GVL5 298 aa9.24□□□□□ -0.93
SYNE1-225ENST00000481502 POTEMA6NI47 508 aa9.24□□□□□ -0.93
SYNE1-225ENST00000481502 EML1O00423 815 aa9.24□□□□□ -0.93
SYNE1-225ENST00000481502 NOP56O00567 594 aaKnown RBP9.24□□□□□ -0.93
SYNE1-225ENST00000481502 TRAK2O60296 914 aa9.24□□□□□ -0.93
SYNE1-225ENST00000481502 GADD45BO75293 160 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-225ENST00000481502 ARIH2O95376 493 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms