RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 PTGDRQ13258 359 aa15.35■□□□□ 0.05
SSPO-205ENST00000475488 RBBP7Q16576 425 aa15.35■□□□□ 0.05
SSPO-205ENST00000475488 CAPS2Q9BXY5 557 aa15.35■□□□□ 0.05
SSPO-205ENST00000475488 G3BP2Q9UN86 482 aaKnown RBP15.35■□□□□ 0.05
SSPO-205ENST00000475488 NEURL1BA8MQ27 555 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 NR2F2P24468 414 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 SLMAPQ14BN4 828 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 FAM173BQ6P4H8 233 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 DDX53Q86TM3 631 aaKnown RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 TEX2Q8IWB9 1127 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 ZWILCHQ9H900 591 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 NFKBIL1Q9UBC1 381 aaPredicted RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 DDIT3P35638 169 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 CFLARO15519 480 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 DNAJC6O75061 913 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 PLS3P13797 630 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 CA4P22748 312 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 EHHADHQ08426 723 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 TAF1BQ53T94 588 aaPredicted RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 CYP4F22Q6NT55 531 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 ENOX1Q8TC92 643 aaKnown RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 SYMPKQ92797 1274 aaKnown RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 FGFR1OP2Q9NVK5 253 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 KIF1BO60333 1816 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 CLCN1P35523 988 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 KRT80Q6KB66 452 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 PHACTR3Q96KR7 559 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 ZMYM3Q14202 1370 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 TNKSO95271 1327 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 SYCE1LA8MT33 242 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 TAGAPQ8N103 731 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 ZFYVE19Q96K21 471 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 INTS9Q9NV88 658 aaKnown RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 HMGXB3Q12766 1538 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 GTPBP6O43824 516 aaPredicted RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 E2F6O75461 281 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 ZBED1O96006 694 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 MT-ND3P03897 115 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 PDXDC1Q6P996 788 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 TCP11Q8WWU5 503 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 TMEM106CQ9BVX2 250 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 CHCHD3Q9NX63 227 aaKnown RBP15.34■□□□□ 0.05
SSPO-205ENST00000475488 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 LEMD3Q9Y2U8 911 aa15.34■□□□□ 0.05
SSPO-205ENST00000475488 TWF2Q6IBS0 349 aaKnown RBP15.33■□□□□ 0.05
SSPO-205ENST00000475488 XPO4Q9C0E2 1151 aaKnown RBP15.33■□□□□ 0.05
SSPO-205ENST00000475488 UPF3AQ9H1J1 476 aaKnown RBP15.33■□□□□ 0.05
SSPO-205ENST00000475488 GUCY2DQ02846 1103 aa15.33■□□□□ 0.05
SSPO-205ENST00000475488 ADCY1Q08828 1119 aa15.33■□□□□ 0.05
SSPO-205ENST00000475488 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.05
SSPO-205ENST00000475488 ANKS3Q6ZW76 656 aa15.33■□□□□ 0.05
SSPO-205ENST00000475488 PATL1Q86TB9 770 aaKnown RBP15.33■□□□□ 0.05
SSPO-205ENST00000475488 KIFC3Q9BVG8 833 aa15.33■□□□□ 0.05
SSPO-205ENST00000475488 L3MBTL1Q9Y468 752 aa15.33■□□□□ 0.05
SSPO-205ENST00000475488 A0A1W2PP64 1363 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 BMP3P12645 472 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 PFKFB1P16118 471 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 FAM180AQ6UWF9 173 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 LRRC31Q6UY01 552 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 SUN2Q9UH99 717 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 AFF4Q9UHB7 1163 aaKnown RBP15.33■□□□□ 0.04
SSPO-205ENST00000475488 MID2Q9UJV3 735 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 PACSIN2Q9UNF0 486 aaPredicted RBP15.33■□□□□ 0.04
SSPO-205ENST00000475488 MEIS1O00470 390 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 CATSPER4Q7RTX7 472 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 ZMAT2Q96NC0 199 aaKnown RBP15.33■□□□□ 0.04
SSPO-205ENST00000475488 MAP3K1Q13233 1512 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 PCP11498 1178 aaKnown RBP15.33■□□□□ 0.04
SSPO-205ENST00000475488 SLC26A7Q8TE54 656 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 WDR91A4D1P6 747 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 ARIH2O95376 493 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 USPL1Q5W0Q7 1092 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 FAM196AQ6ZSG2 479 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 MAML1Q92585 1016 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 ASIC4Q96FT7 647 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 TBK1Q9UHD2 729 aa15.33■□□□□ 0.04
SSPO-205ENST00000475488 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.33■□□□□ 0.04
SSPO-205ENST00000475488 RPRD2Q5VT52 1461 aaKnown RBP15.33■□□□□ 0.04
SSPO-205ENST00000475488 LAD1O00515 517 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 ZSCAN9O15535 394 aaPredicted RBP15.32■□□□□ 0.04
SSPO-205ENST00000475488 TCP1P17987 556 aaKnown RBP15.32■□□□□ 0.04
SSPO-205ENST00000475488 ULK4Q96C45 1275 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 DESI2Q9BSY9 194 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 MSTO1Q9BUK6 570 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 EDEM3Q9BZQ6 932 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 KRT87PA6NCN2 255 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 LBRQ14739 615 aaKnown RBP15.32■□□□□ 0.04
SSPO-205ENST00000475488 DNAJC7Q99615 494 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 ZC4H2Q9NQZ6 224 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 COL17A1Q9UMD9 1497 aaPredicted RBP15.32■□□□□ 0.04
SSPO-205ENST00000475488 GCKP35557 465 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 SLC16A2P36021 539 aa15.32■□□□□ 0.04
SSPO-205ENST00000475488 BLMP54132 1417 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms