RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 RGS22Q8NE09 1264 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 ALG3Q92685 438 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 LOXL4Q96JB6 756 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 DHRS1Q96LJ7 313 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 SLC6A18Q96N87 628 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
VPS8-219ENST00000469479 AKAP12Q02952 1782 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 ADGRB1O14514 1584 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 ABCC6O95255 1503 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 NHSQ6T4R5 1651 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 GREM1O60565 184 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 NME1P15531 152 aaKnown RBP6.8□□□□□ -1.32
VPS8-219ENST00000469479 COL24A1Q17RW2 1714 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 QSER1Q2KHR3 1735 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 PTF1AQ7RTS3 328 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 REXO1Q8N1G1 1221 aaKnown RBP6.8□□□□□ -1.32
VPS8-219ENST00000469479 C8orf49Q96NF6 230 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 MRIQ9BWK5 157 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 TFCP2L1Q9NZI6 479 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
VPS8-219ENST00000469479 USP6P35125 1406 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 CPSF1Q10570 1443 aaKnown RBP6.79□□□□□ -1.32
VPS8-219ENST00000469479 TNFRSF10CO14798 259 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 FGF10O15520 208 aaPredicted RBP6.79□□□□□ -1.32
VPS8-219ENST00000469479 SORBS3O60504 671 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 PLATP00750 562 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 GDF5P43026 501 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 USP48Q86UV5 1035 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 ZNF761Q86XN6 746 aaPredicted RBP6.79□□□□□ -1.32
VPS8-219ENST00000469479 KCNH5Q8NCM2 988 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 CPA5Q8WXQ8 436 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 KBTBD4Q9NVX7 518 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 SLIT3O75094 1523 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 TRPM1Q7Z4N2 1603 aa6.79□□□□□ -1.32
VPS8-219ENST00000469479 PNPLA7Q6ZV29 1317 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 TBC1D8O95759 1140 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 EIF4A3P38919 411 aaKnown RBP6.78□□□□□ -1.32
VPS8-219ENST00000469479 MC3RP41968 323 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 FSTL1Q12841 308 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 CHST13Q8NET6 341 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 DVL3Q92997 716 aaPredicted RBP6.78□□□□□ -1.32
VPS8-219ENST00000469479 TSPAN17Q96FV3 270 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 SLITRK6Q9H5Y7 841 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 WNK3Q9BYP7 1800 aa6.78□□□□□ -1.32
VPS8-219ENST00000469479 PPIP5K1Q6PFW1 1433 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 C6P13671 934 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 L1CAMP32004 1257 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 SLC9A5Q14940 896 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 TBC1D10BQ4KMP7 808 aaPredicted RBP6.77□□□□□ -1.33
VPS8-219ENST00000469479 CABP7Q86V35 215 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 C16orf71Q8IYS4 520 aaPredicted RBP6.77□□□□□ -1.33
VPS8-219ENST00000469479 FAM161BQ96MY7 647 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 CDK19Q9BWU1 502 aa6.77□□□□□ -1.33
VPS8-219ENST00000469479 SCAND2PQ9GZW5 306 aaPredicted RBP6.77□□□□□ -1.33
VPS8-219ENST00000469479 SPATA6Q9NWH7 488 aaPredicted RBP6.77□□□□□ -1.33
VPS8-219ENST00000469479 SUCOQ9UBS9 1254 aaKnown RBP6.77□□□□□ -1.33
VPS8-219ENST00000469479 ZBTB7CA1YPR0 619 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 MEIS3P2A8K0S8 358 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 PATL2C9JE40 543 aaKnown RBP6.76□□□□□ -1.33
VPS8-219ENST00000469479 TACR2P21452 398 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 PMLP29590 882 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 TRIM26Q12899 539 aaPredicted RBP6.76□□□□□ -1.33
VPS8-219ENST00000469479 ERMP1Q7Z2K6 904 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 ARHGEF25Q86VW2 580 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 CCDC144CPQ8IYA2 1237 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 MRS2Q9HD23 443 aa6.76□□□□□ -1.33
VPS8-219ENST00000469479 ARHGEF28Q8N1W1 1705 aaKnown RBP6.76□□□□□ -1.33
VPS8-219ENST00000469479 CYR61O00622 381 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 GLI4P10075 376 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 IL2RBP14784 551 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 TACR1P25103 407 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 ZNF165P49910 485 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 CLCQ05315 142 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 CACNB2Q08289 660 aaPredicted RBP6.75□□□□□ -1.33
VPS8-219ENST00000469479 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 NOL9Q5SY16 702 aaKnown RBP6.75□□□□□ -1.33
VPS8-219ENST00000469479 INTS3Q68E01 1043 aaKnown RBP6.75□□□□□ -1.33
VPS8-219ENST00000469479 GK5Q6ZS86 529 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 LGI4Q8N135 537 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 SMARCC2Q8TAQ2 1214 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 ADAMTS17Q8TE56 1095 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 PEX11GQ96HA9 241 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 PTCHD1Q96NR3 888 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 MPHOSPH9Q99550 1183 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 VTI1BQ9UEU0 232 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 NSD3Q9BZ95 1437 aa6.75□□□□□ -1.33
VPS8-219ENST00000469479 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 H0Y8X5 98 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
VPS8-219ENST00000469479 SEZ6Q53EL9 994 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 FAM124AQ86V42 546 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 ZNF296Q8WUU4 475 aaPredicted RBP6.74□□□□□ -1.33
VPS8-219ENST00000469479 SMARCC1Q92922 1105 aaPredicted RBP6.74□□□□□ -1.33
VPS8-219ENST00000469479 ZBTB8AQ96BR9 441 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 NOX5Q96PH1 765 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 SLC9A7Q96T83 725 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms