RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 PALD1Q9ULE6 856 aa6.9□□□□□ -1.3
GAPVD1-211ENST00000467707 WASHC2CQ9Y4E1 1318 aa6.9□□□□□ -1.3
GAPVD1-211ENST00000467707 SGSM2O43147 1006 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 MAPKAPK2P49137 400 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 EVA1CP58658 441 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 CREB3L3Q68CJ9 461 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 IQSEC1Q6DN90 963 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 CBLL1Q75N03 491 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 MILR1Q7Z6M3 343 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 NME9Q86XW9 330 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 IRF2BP1Q8IU81 584 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 KIAA1958Q8N8K9 716 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 DLG3Q92796 817 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 ZFP64Q9NPA5 681 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 SPTLC3Q9NUV7 552 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 SPEF1Q9Y4P9 236 aa6.89□□□□□ -1.31
GAPVD1-211ENST00000467707 TCRBV5S2A0A599 114 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 OR14I1A6ND48 311 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 F8W031 263 aaPredicted RBP6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 SLC27A2O14975 620 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 PTPN1P18031 435 aaKnown RBP6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 ID4P47928 161 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 FNTBP49356 437 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 HERVK_113P62684 666 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 TUSC3Q13454 348 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 FAM50AQ14320 339 aaKnown RBP6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 RAB3GAP1Q15042 981 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 DDB1Q16531 1140 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 ODR4Q5SWX8 454 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 ADGRF1Q5T601 910 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 LHFPL2Q6ZUX7 228 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 SIRT2Q8IXJ6 389 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 SLC5A5Q92911 643 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 CD244Q9BZW8 370 aa6.88□□□□□ -1.31
GAPVD1-211ENST00000467707 SCDO00767 359 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 KRT37O76014 449 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 GLI1P08151 1106 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 SDHAP31040 664 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 LSP1P33241 339 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 KIF11P52732 1056 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 LRRC32Q14392 662 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 NGRNQ9NPE2 291 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 HSPBP1Q9NZL4 362 aa6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 USP36Q9P275 1121 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-211ENST00000467707 ZC3H12DA2A288 527 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 BUB1BO60566 1050 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 KATNA1O75449 491 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 EPHB1P54762 984 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 SMAD3P84022 425 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 ITKQ08881 620 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 MTMR1Q13613 665 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 TERF2Q15554 542 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 SMAD2Q15796 467 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 SYDE2Q5VT97 1194 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 BTBD8Q5XKL5 378 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 ZC3H14Q6PJT7 736 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 RPTNQ6XPR3 784 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 ZSWIM9Q86XI8 627 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 CNTD1Q8N815 330 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 ZNF610Q8N9Z0 462 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 MTMR8Q96EF0 704 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 ELF4Q99607 663 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 ASPSCR1Q9BZE9 553 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 TOMM22Q9NS69 142 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 RIC8BQ9NVN3 520 aa6.86□□□□□ -1.31
GAPVD1-211ENST00000467707 DVL2O14641 736 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 KCNK3O14649 394 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 TGM5O43548 720 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 ALDH1L1O75891 902 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 SLC9A1P19634 815 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 CD40P25942 277 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 PDE6BP35913 854 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 PRR5P85299 388 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 ADCY1Q08828 1119 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 EPHA7Q15375 998 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 KCNMB1Q16558 191 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 BROXQ5VW32 411 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 CPZQ66K79 652 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 HDGFL2Q7Z4V5 671 aaPredicted RBP6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 RASSF3Q86WH2 238 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 MIB1Q86YT6 1006 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 E2F7Q96AV8 911 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 YIPF4Q9BSR8 244 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 DTLQ9NZJ0 730 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 H2AFY2Q9P0M6 372 aaPredicted RBP6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 KLHL42Q9P2K6 505 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 SIT1Q9Y3P8 196 aa6.85□□□□□ -1.31
GAPVD1-211ENST00000467707 FAM90A27PA6NNH2 459 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 FOXP2O15409 715 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 PRKD3O94806 890 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 FAHP16930 419 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 GALK1P51570 392 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 PLEKHN1Q494U1 663 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 FYB2Q5VWT5 728 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 AMIGO3Q86WK7 504 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 FAM126BQ8IXS8 530 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
GAPVD1-211ENST00000467707 CLEC4DQ8WXI8 215 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms