RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 RALGPS1Q5JS13 557 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 CCDC84Q86UT8 332 aaPredicted RBP6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 ANKRD18AQ8IVF6 992 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 GPC2Q8N158 579 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 KLHDC4Q8TBB5 520 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 JDP2Q8WYK2 163 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 DUSP15Q9H1R2 295 aaPredicted RBP6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 TAF1DQ9H5J8 278 aaPredicted RBP6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 ZBED9Q6R2W3 1325 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 DNAJC25-GNG10A0A024R161 153 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 PSMD14O00487 310 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 ECE2O60344 883 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 UFL1O94874 794 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 F13A1P00488 732 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 CT47B1P0C2W7 299 aaPredicted RBP6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 TRIM27P14373 513 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 HSPA6P17066 643 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 GMPSP49915 693 aaPredicted RBP6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 CCT4P50991 539 aaKnown RBP6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 LMNB2Q03252 620 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 CHRNDQ07001 517 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 LRRC24Q50LG9 513 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 MPZL3Q6UWV2 235 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 DLK2Q6UY11 383 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 TMPRSS7Q7RTY8 843 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 NIM1KQ8IY84 436 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 FAM13CQ8NE31 585 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 CYB5D2Q8WUJ1 264 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 GATAD2BQ8WXI9 593 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 CRELD1Q96HD1 420 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 MEIS3Q99687 375 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 MXD3Q9BW11 206 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 C9orf78Q9NZ63 289 aaPredicted RBP6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 ZNRF3Q9ULT6 936 aa6.03□□□□□ -1.44
EXOSC3-204ENST00000465860 TRPM7Q96QT4 1865 aa6.02□□□□□ -1.44
EXOSC3-204ENST00000465860 XDHP47989 1333 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 MYH13Q9UKX3 1938 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 ANKRD18BA2A2Z9 1011 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 BPNT1O95861 308 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 PDIA4P13667 645 aaKnown RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 TPP2P29144 1249 aaPredicted RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 EPHX2P34913 555 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 RFX5P48382 616 aaPredicted RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 EIF6P56537 245 aaKnown RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 GAB4Q2WGN9 574 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 RABL6Q3YEC7 729 aaPredicted RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 TMEM201Q5SNT2 666 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 TTC6Q86TZ1 520 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 CREG2Q8IUH2 290 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 CILP2Q8IUL8 1156 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 SUPT20HQ8NEM7 779 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 BHLHE22Q8NFJ8 381 aaPredicted RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 FRAT1Q92837 279 aaPredicted RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 CCDC120Q96HB5 630 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 RHOVQ96L33 236 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 CDC5LQ99459 802 aaKnown RBP6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 VPS33BQ9H267 617 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 GPRC5DQ9NZD1 345 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 HACL1Q9UJ83 578 aa6.02□□□□□ -1.45
EXOSC3-204ENST00000465860 PLIN1O60240 522 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 SORBS3O60504 671 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 SRFP11831 508 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 HSP90B1P14625 803 aaKnown RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 IGHMBP2P38935 993 aaKnown RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 ERVFC1P60507 584 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 IFIT5Q13325 482 aaKnown RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 CIAPIN1Q6FI81 312 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 C16orf71Q8IYS4 520 aaPredicted RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 DNAJC5GQ8N7S2 189 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 DTWD2Q8NBA8 298 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 GMLQ99445 158 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 TMX4Q9H1E5 349 aaPredicted RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 TMEM59LQ9UK28 342 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 PA2G4Q9UQ80 394 aaKnown RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 POLR3KQ9Y2Y1 108 aaPredicted RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 RIPOR2Q9Y4F9 1068 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 LRRFIP2Q9Y608 721 aaKnown RBP6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 ARAP2Q8WZ64 1704 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 MED23Q9ULK4 1368 aa6.01□□□□□ -1.45
EXOSC3-204ENST00000465860 ZNF804BA4D1E1 1349 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 ASTN2O75129 1339 aaPredicted RBP6□□□□□ -1.45
EXOSC3-204ENST00000465860 PASKQ96RG2 1323 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 ECM29Q5VYK3 1845 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 TRAF5O00463 557 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 LRRN2O75325 713 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 VIL1P09327 827 aaKnown RBP6□□□□□ -1.45
EXOSC3-204ENST00000465860 GBP2P32456 591 aaPredicted RBP6□□□□□ -1.45
EXOSC3-204ENST00000465860 HK2P52789 917 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 YARSP54577 528 aaKnown RBP6□□□□□ -1.45
EXOSC3-204ENST00000465860 FSTL1Q12841 308 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 CCDC57Q2TAC2 916 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 INTS3Q68E01 1043 aaKnown RBP6□□□□□ -1.45
EXOSC3-204ENST00000465860 ATF7IPQ6VMQ6 1270 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 LDHAL6AQ6ZMR3 332 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 SPOCD1Q6ZMY3 1216 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 SYDE1Q6ZW31 735 aaPredicted RBP6□□□□□ -1.45
EXOSC3-204ENST00000465860 ATG9AQ7Z3C6 839 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 SLFN12Q8IYM2 578 aa6□□□□□ -1.45
EXOSC3-204ENST00000465860 TMEM57Q8N5G2 664 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms