RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 B4E1Z4 1266 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 PDE6AP16499 860 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 LRRC63Q05C16 580 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 SSRP1Q08945 709 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 IFI16Q16666 785 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 ZCWPW2Q504Y3 356 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 DPY19L2P1Q6NXN4 242 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 TEX9Q8N6V9 391 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CASKIN2Q8WXE0 1202 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 FMO2Q99518 471 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 TLE6Q9H808 572 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CPSF2Q9P2I0 782 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 BAIAP2L1Q9UHR4 511 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 KCPQ6ZWJ8 1503 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 GBP2P32456 591 aaPredicted RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 SLC18A1P54219 525 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 KLC1Q07866 573 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 MAP3K12Q12852 859 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 MTMR3Q13615 1198 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 APBB1IPQ7Z5R6 666 aaPredicted RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 CPLX4Q7Z7G2 160 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 ENDOVQ8N8Q3 282 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 GOLGA6L10A6NI86 522 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 STXBP3O00186 592 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 GSTA2P09210 222 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 PRKCIP41743 596 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 IL17AQ16552 155 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 C2CD5Q86YS7 1000 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 UTP4Q969X6 686 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 NAF1Q96HR8 494 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 NOX5Q96PH1 765 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 TMEM237Q96Q45 408 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 ISCA1Q9BUE6 129 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 SLC26A6Q9BXS9 759 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 MYO7AQ13402 2215 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CICQ96RK0 1608 aaPredicted RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 TLR2O60603 784 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 ECM2O94769 699 aaPredicted RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 KRT16P08779 473 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CLTAP09496 248 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 AFMP43652 599 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 YARSP54577 528 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 RGS9BPQ6ZS82 235 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 DZIP3Q86Y13 1208 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 C7orf25Q9BPX7 421 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 KRT23Q9C075 422 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 SLC52A2Q9HAB3 445 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 HAUS2Q9NVX0 235 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 FBXL5Q9UKA1 691 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 INTUQ9ULD6 942 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 LRCH1Q9Y2L9 728 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 GOLGA6L10A0A0M3HER8 536 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 CCDC169A6NNP5 214 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 F8VZ95 297 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 FLOT1O75955 427 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 VIMP08670 466 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 KLRC1P26715 233 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 SPA17Q15506 151 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 ANO7Q6IWH7 933 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 CACNA2D4Q7Z3S7 1137 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 NCAPG2Q86XI2 1143 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 XPO6Q96QU8 1125 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 ZDHHC18Q9NUE0 388 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 SLC12A7Q9Y666 1083 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 DIDO1Q9BTC0 2240 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 RAD51CO43502 376 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 NOL4O94818 638 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 RPSAP08865 295 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 CALB2P22676 271 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 NCALDP61601 193 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 KCNJ2P63252 427 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 FKBP3Q00688 224 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 ATP2B2Q01814 1243 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 MAN2A1Q16706 1144 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 LRRC55Q6ZSA7 311 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.62□□□□□ -1.51
RIF1-203ENST00000428287 KIF9Q9HAQ2 790 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 PRKAG3Q9UGI9 489 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 CNOT7Q9UIV1 285 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 NENFQ9UMX5 172 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 PCDHA3Q9Y5H8 950 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 FLT1P17948 1338 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 BICDL2A1A5D9 508 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 POTEFA5A3E0 1075 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 NBPF26B4DH59 902 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 AKR1B10O60218 316 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 PPP1R12BO60237 982 aaPredicted RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 UBOX5O94941 541 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 POTEIP0CG38 1075 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 POTEJP0CG39 1038 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 XBP1P17861 261 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 MAGOHP61326 146 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 CWF19L1Q69YN2 538 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 POTEEQ6S8J3 1075 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 TBC1D5Q92609 795 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 MAGOHBQ96A72 148 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 MMTAG2Q9BU76 263 aaKnown RBP5.62□□□□□ -1.51
RIF1-203ENST00000428287 RABEP2Q9H5N1 569 aa5.62□□□□□ -1.51
RIF1-203ENST00000428287 RXFP1Q9HBX9 757 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms