RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 FAM204AQ9H8W3 233 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 GFOD1Q9NXC2 390 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 PPARGC1AQ9UBK2 798 aaKnown RBP6.09□□□□□ -1.43
VPS13A-207ENST00000419472 MLH3Q9UHC1 1453 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 POLG2Q9UHN1 485 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 KIAA1107Q9UPP5 1409 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 RASA4BC9J798 803 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 H0Y8X5 98 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 TM4SF5O14894 197 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 KPNA5O15131 536 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 RASA4O43374 803 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 NCK2O43639 380 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 TLR5O60602 858 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 ADAM11O75078 769 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 CPP00450 1065 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 PEX2P28328 305 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 AMPD2Q01433 879 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 TTLL4Q14679 1199 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 GRIK5Q16478 980 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 CFAP161Q6P656 301 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
VPS13A-207ENST00000419472 IL17REQ8NFR9 667 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 FAM193BQ96PV7 902 aaPredicted RBP6.09□□□□□ -1.43
VPS13A-207ENST00000419472 VPS11Q9H270 941 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 FBXO2Q9UK22 296 aaPredicted RBP6.09□□□□□ -1.43
VPS13A-207ENST00000419472 CBLCQ9ULV8 474 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 ZNF652Q9Y2D9 606 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 PCDHB12Q9Y5F1 795 aa6.09□□□□□ -1.43
VPS13A-207ENST00000419472 SRSF2Q01130 221 aaKnown RBP6.08□□□□□ -1.44
VPS13A-207ENST00000419472 FAM180BQ6P0A1 224 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 CC2D1AQ6P1N0 951 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-207ENST00000419472 MIER2Q8N344 545 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 TNFRSF25Q93038 417 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 KREMEN1Q96MU8 473 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 PRDM14Q9GZV8 571 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 TUBD1Q9UJT1 453 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 FHOD1Q9Y613 1164 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 SAMD9LQ8IVG5 1584 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 AGLP35573 1532 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 C9orf84Q5VXU9 1444 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 SCAPERQ9BY12 1400 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 SIN3BO75182 1162 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 SLFN14P0C7P3 912 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 CCT5P48643 541 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 ID3Q02535 119 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 PAK1Q13153 545 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 MYBPC2Q14324 1141 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 ARMC3Q5W041 872 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 EFHBQ8N7U6 833 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 PPM1NQ8N819 430 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 GALNT11Q8NCW6 608 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 DEPTORQ8TB45 409 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 RIN2Q8WYP3 895 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-207ENST00000419472 CCDC140Q96MF4 163 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 MYLK2Q9H1R3 596 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 VPS45Q9NRW7 570 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 ASAP1Q9ULH1 1129 aa6.08□□□□□ -1.44
VPS13A-207ENST00000419472 GPATCH8Q9UKJ3 1502 aaKnown RBP6.08□□□□□ -1.44
VPS13A-207ENST00000419472 H7C1W4 665 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 J3KRW8 73 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 MAN1A2O60476 641 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 VCAM1P19320 739 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ARL4DP49703 201 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 GPR85P60893 370 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 SLC9A5Q14940 896 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 C1orf122Q6ZSJ8 110 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 TRIM22Q8IYM9 498 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 SYTL5Q8TDW5 730 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-207ENST00000419472 COPS5Q92905 334 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 LRFN3Q9BTN0 628 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 IPPKQ9H8X2 491 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 DNAJC28Q9NX36 388 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 HCSTQ9UBK5 93 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 SLC45A1Q9Y2W3 748 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 INO80Q9ULG1 1556 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-207ENST00000419472 FAM135AQ9P2D6 1515 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 MTUS2Q5JR59 1369 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 SLC35F4A4IF30 521 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 FIBPO43427 364 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 LRRN2O75325 713 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ALDH2P05091 517 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ZBTB48P10074 688 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-207ENST00000419472 AKAP5P24588 427 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 COPB2P35606 906 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 PPM1AP35813 382 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 NBPF9Q3BBW0 867 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 DACT2Q5SW24 774 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 LBX2Q6XYB7 198 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 C2orf69Q8N8R5 385 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ZNF507Q8TCN5 953 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 MAP3K14Q99558 947 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ELF4Q99607 663 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-207ENST00000419472 CSRNP2Q9H175 543 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 NOC2LQ9Y3T9 749 aaKnown RBP6.07□□□□□ -1.44
VPS13A-207ENST00000419472 NPFFR2Q9Y5X5 522 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ATP10AO60312 1499 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ADGBQ8N7X0 1667 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 ARHGEF5Q12774 1597 aa6.07□□□□□ -1.44
VPS13A-207ENST00000419472 DIP2CQ9Y2E4 1556 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms