RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ACRBPQ8NEB7 543 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 REPS2Q8NFH8 660 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 AK8Q96MA6 479 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 AMNQ9BXJ7 453 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ST7Q9NRC1 585 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ZNF536O15090 1300 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CCDC151A5D8V7 595 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ATP2A1O14983 1001 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 KLRC4O43908 158 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 OAZ1P54368 228 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 HTRA3P83110 453 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 KRT25Q7Z3Z0 450 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 NAPGQ99747 312 aaPredicted RBP17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 UBXN6Q9BZV1 441 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 EPC1Q9H2F5 836 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PNMA2Q9UL42 364 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 A0A0U1RQJ8 604 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ICAM1P05362 532 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CYP2C8P10632 490 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 HSPA6P17066 643 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ARHGAP25P42331 645 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 TRAF1Q13077 416 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 WHAMMP3Q1A5X7 153 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 FBXO11Q86XK2 927 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SLC35F6Q8N357 371 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ATRIPQ8WXE1 791 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CCDC47Q96A33 483 aaKnown RBP17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 DHTKD1Q96HY7 919 aaPredicted RBP17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 MAPK8IP1Q9UQF2 711 aa17.71■□□□□ 0.43
CHRFAM7A-203ENST00000401522 RNF225M0QZC1 329 aaPredicted RBP17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 AOC2O75106 756 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 MAP2K2P36507 400 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 VEGFBP49765 207 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 OR8K1Q8NGG5 319 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 GTF3C2Q8WUA4 911 aaPredicted RBP17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PARK7Q99497 189 aaKnown RBP17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 ZMYND12Q9H0C1 365 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 ZNF214Q9UL59 606 aaPredicted RBP17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 CTDP1Q9Y5B0 961 aaPredicted RBP17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PCDHA1Q9Y5I3 950 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PP2D1A8MPX8 630 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PPP1R2P41236 205 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TMEM132BQ14DG7 1078 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TAF3Q5VWG9 929 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TRIM47Q96LD4 638 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 DNAJC7Q99615 494 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 RBPJLQ9UBG7 517 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 A0A0G2JMZ2 1700 aa17.7■□□□□ 0.42
CHRFAM7A-203ENST00000401522 SASH3O75995 380 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 OR52Z1P0C646 297 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 ORC2Q13416 577 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 CPXCR1Q8N123 301 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 MSANTD4Q8NCY6 345 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 ZNF507Q8TCN5 953 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 HNRNPLLQ8WVV9 542 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 COA7Q96BR5 231 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 AGBL1Q96MI9 1066 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 RAVER2Q9HCJ3 691 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 CAPN11Q9UMQ6 739 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 LUC7L2Q9Y383 392 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 RABGAP1Q9Y3P9 1069 aa17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 EPN1Q9Y6I3 576 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-203ENST00000401522 BICDL2A1A5D9 508 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TRIM49BA6NDI0 452 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 NDUFA10O95299 355 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 GNA11P29992 359 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 GCLCP48506 637 aaPredicted RBP17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 DNM2P50570 870 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 NAPAP54920 295 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 NONOQ15233 471 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TTI2Q6NXR4 508 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 CABP7Q86V35 215 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TEX13BQ9BXU2 312 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 C6orf50Q9HD87 102 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 BTBD7Q9P203 1132 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 RAB21Q9UL25 225 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 COL11A1P12107 1806 aaPredicted RBP17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TTC26A0AVF1 554 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 CNMDO75829 334 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 ALDH1A1P00352 501 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TUBBP07437 444 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PMS1P54277 932 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PPP1R18Q6NYC8 613 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 FAM114A1Q8IWE2 563 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 FUT8Q9BYC5 575 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 TXNRD2Q9NNW7 524 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PUF60Q9UHX1 559 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 CCPG1Q9ULG6 757 aa17.68■□□□□ 0.42
CHRFAM7A-203ENST00000401522 PLCG1P19174 1290 aa17.67■□□□□ 0.42
CHRFAM7A-203ENST00000401522 STAT3P40763 770 aa17.67■□□□□ 0.42
CHRFAM7A-203ENST00000401522 LONRF2Q1L5Z9 754 aa17.67■□□□□ 0.42
CHRFAM7A-203ENST00000401522 USH1GQ495M9 461 aa17.67■□□□□ 0.42
CHRFAM7A-203ENST00000401522 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
CHRFAM7A-203ENST00000401522 C7orf25Q9BPX7 421 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms