RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 SFPQP23246 707 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCT4-201ENST00000394440 PABPC4Q13310 644 aaKnown RBP eCLIP16.65■□□□□ 0.261e-7■■■■□ 23.8
CCT4-201ENST00000394440 EPHA7Q15375 998 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 PRRT2Q7Z6L0 340 aaPredicted RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 ERO1BQ86YB8 467 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 ELP3Q9H9T3 547 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 IRF6O14896 467 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 CHMP2AO43633 222 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 SKILP12757 684 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 EEF1GP26641 437 aaKnown RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 NF2P35240 595 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 COPB1P53618 953 aaKnown RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 ITGB3BPQ13352 177 aaPredicted RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 FAM26FQ5R3K3 315 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 GLIS3Q8NEA6 775 aa16.65■□□□□ 0.26
CCT4-201ENST00000394440 PURBQ96QR8 312 aaKnown RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 SRRTQ9BXP5 876 aaKnown RBP16.65■□□□□ 0.26
CCT4-201ENST00000394440 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 OFD1O75665 1012 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 GIT2Q14161 759 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 FILIP1LQ4L180 1135 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 XRRA1Q6P2D8 792 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 LBX2Q6XYB7 198 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 MOB2Q70IA6 237 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 CSGALNACT2Q8N6G5 542 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 ACAD9Q9H845 621 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 MTMR1Q13613 665 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 CTTNQ14247 550 aaKnown RBP16.64■□□□□ 0.25
CCT4-201ENST00000394440 BHMT2Q9H2M3 363 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 TMX1Q9H3N1 280 aa16.64■□□□□ 0.25
CCT4-201ENST00000394440 A1CFQ9NQ94 594 aaKnown RBP16.64■□□□□ 0.25
CCT4-201ENST00000394440 MYH11P35749 1972 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 IQCA1LA6NCM1 817 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 CXCL11O14625 94 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 NEK9Q8TD19 979 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 FGFBP2Q9BYJ0 223 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 CYP39A1Q9NYL5 469 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 WRAP73Q9P2S5 460 aaPredicted RBP16.63■□□□□ 0.25
CCT4-201ENST00000394440 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
CCT4-201ENST00000394440 ZCWPW2Q504Y3 356 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 VSIG10LQ86VR7 867 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 REEP2Q9BRK0 252 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 TAB2Q9NYJ8 693 aa16.63■□□□□ 0.25
CCT4-201ENST00000394440 KIF3CO14782 793 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 LRRC63Q05C16 580 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 DOCK5Q9H7D0 1870 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 N4BP3O15049 544 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 KCNJ6P48051 423 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 PPIL2Q13356 520 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 LRRC41Q15345 812 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 TPH2Q8IWU9 490 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 RUSC1Q9BVN2 902 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 VPS16Q9H269 839 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 KCND1Q9NSA2 647 aa16.62■□□□□ 0.25
CCT4-201ENST00000394440 NR3C2P08235 984 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 MYCLP12524 364 aaPredicted RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 RAD51AP2Q09MP3 1159 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 RINT1Q6NUQ1 792 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 MB21D1Q8N884 522 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 CHST13Q8NET6 341 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 PIGOQ8TEQ8 1089 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 INPP4AQ96PE3 977 aaPredicted RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 LXNQ9BS40 222 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 KRT18P05783 430 aaKnown RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 CCND2P30279 289 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 MOGSQ13724 837 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 EAPPQ56P03 285 aaPredicted RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 HERC4Q5GLZ8 1057 aaPredicted RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 LRRC55Q6ZSA7 311 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 CCDC112Q8NEF3 446 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 NSUN6Q8TEA1 469 aaKnown RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 GPRASP2Q96D09 838 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
CCT4-201ENST00000394440 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
CCT4-201ENST00000394440 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 LGALS16A8MUM7 142 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 DDX39AO00148 427 aaKnown RBP16.6■□□□□ 0.25
CCT4-201ENST00000394440 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 GADL1Q6ZQY3 521 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 C1orf186Q6ZWK4 172 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 MIER3Q7Z3K6 550 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
CCT4-201ENST00000394440 FAM114A1Q8IWE2 563 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms