RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 ZBTB16Q05516 673 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 TRIM28Q13263 835 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 PLA2G4EQ3MJ16 856 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC152Q4G0S7 254 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC38Q502W7 563 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CEP55Q53EZ4 464 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC178Q5BJE1 867 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 ODF2Q5BJF6 829 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 TTC39AQ5SRH9 613 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 C6orf132Q5T0Z8 1188 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 FKBP15Q5T1M5 1219 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 FOXB2Q5VYV0 432 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 HGSNATQ68CP4 663 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 GBP6Q6ZN66 633 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 DBX2Q6ZNG2 339 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 KIAA1211Q6ZU35 1233 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC80Q76M96 950 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 SAMD7Q7Z3H4 446 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 DPP9Q86TI2 863 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 NCAPG2Q86XI2 1143 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 SIAH1Q8IUQ4 282 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 FAM178BQ8IXR5 827 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 RBM12BQ8IXT5 1001 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 PEX5LQ8IYB4 626 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 LRRC47Q8N1G4 583 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 FAM184AQ8NB25 1140 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 ANKRD52Q8NB46 1076 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 AVL9Q8NBF6 648 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 RBBP8NLQ8NC74 664 aaPredicted RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 ZNF280CQ8ND82 737 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 TNIP2Q8NFZ5 429 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 RASSF8Q8NHQ8 419 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 GOT1L1Q8NHS2 421 aaPredicted RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 DIS3LQ8TF46 1054 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 ASB12Q8WXK4 309 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 SHC3Q92529 594 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 FATE1Q969F0 183 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC74AQ96AQ1 378 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 GIMAP5Q96F15 307 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CDCA7LQ96GN5 454 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 COG3Q96JB2 828 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 EXOC2Q96KP1 924 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 RIPOR3Q96MK2 946 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 EYA3Q99504 573 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 SH3GL1Q99961 368 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 RHOXF2Q9BQY4 288 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 TRIM56Q9BRZ2 755 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CRACR2AQ9BSW2 395 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 TMEM120AQ9BXJ8 343 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 MRPL4Q9BYD3 311 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 EDEM3Q9BZQ6 932 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 TRIM7Q9C029 511 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 ARHGAP39Q9C0H5 1083 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 MRPL46Q9H2W6 279 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 GHITMQ9H3K2 345 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 SMOC1Q9H4F8 434 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CD93Q9NPY3 652 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CRTAC1Q9NQ79 661 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 ITM2CQ9NQX7 267 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 RXFP3Q9NSD7 469 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 OLA1Q9NTK5 396 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 ANKIB1Q9P2G1 1089 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 MTUS1Q9ULD2 1270 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 JAG2Q9Y219 1238 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 CAB39Q9Y376 341 aaPredicted RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 RTCBQ9Y3I0 505 aaKnown RBP3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 PARP3Q9Y6F1 533 aa3.77□□□□□ -1.81
TRAJ17-201ENST00000390520 LRRC14BA6NHZ5 514 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 LRRC72A6NJI9 287 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 CCDC169A6NNP5 214 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 H0YHG0 523 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 UBXN8O00124 270 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 TLR3O15455 904 aaKnown RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 RNF113AO15541 343 aaKnown RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 DOK2O60496 412 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 PQBP1O60828 265 aaKnown RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 KINO60870 393 aaKnown RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 DAB1O75553 588 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 SLITRK3O94933 977 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 SGPL1O95470 568 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 F12P00748 615 aaPredicted RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 PCP11498 1178 aaKnown RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 SCG2P13521 617 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 ZNF24P17028 368 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 ALOX12P18054 663 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 IL11P20809 199 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 ALAS2P22557 587 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 NOS3P29474 1203 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 MC4RP32245 332 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 HSD17B2P37059 387 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 IARSP41252 1262 aaKnown RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 LIFRP42702 1097 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 PSMC4P43686 418 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 NOP2P46087 812 aaKnown RBP3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 ID4P47928 161 aa3.76□□□□□ -1.81
TRAJ17-201ENST00000390520 TUBP50607 506 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms