RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 STIM1Q13586 685 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 GIT2Q14161 759 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 SYCP1Q15431 976 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 FAM26FQ5R3K3 315 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 KRT26Q7Z3Y9 468 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 SLFN12Q8IYM2 578 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 NOC4LQ9BVI4 516 aaKnown RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 TRIM10Q9UDY6 481 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 USP20Q9Y2K6 914 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 AKR1B15C9JRZ8 316 aaPredicted RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 IRF6O14896 467 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 PLEKP08567 350 aaPredicted RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 HOXD13P35453 343 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 CNTN2Q02246 1040 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 TBC1D8BQ0IIM8 1120 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 UGCGQ16739 394 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 FILIP1LQ4L180 1135 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 MIIPQ5JXC2 388 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 CCDC150Q8NCX0 1101 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 STK17AQ9UEE5 414 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 LIMA1Q9UHB6 759 aaKnown RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 COL2A1P02458 1487 aaPredicted RBP11.28□□□□□ -0.6
LTN1-203ENST00000389195 RPA1P27694 616 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 KRT9P35527 623 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 ERVK-24P63145 666 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 RNF207Q6ZRF8 634 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 RDH13Q8NBN7 331 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 HSD17B14Q9BPX1 270 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 MMRN2Q9H8L6 949 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 GPRC5CQ9NQ84 441 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 DNAI1Q9UI46 699 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 CIITAP33076 1130 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 NPEPPSP55786 919 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 PLA2G4FQ68DD2 849 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 WDR24Q96S15 920 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 LXNQ9BS40 222 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 CUEDC2Q9H467 287 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 MAGEC2Q9UBF1 373 aaPredicted RBP11.28□□□□□ -0.6
LTN1-203ENST00000389195 PPP2R2CQ9Y2T4 447 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 RABGAP1Q9Y3P9 1069 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 PCDHA2Q9Y5H9 948 aa11.28□□□□□ -0.6
LTN1-203ENST00000389195 CASP4P49662 377 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 CENPPQ6IPU0 288 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 RINT1Q6NUQ1 792 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 GADL1Q6ZQY3 521 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 MYOCDQ8IZQ8 938 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 MFAP3LO75121 409 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 GCNT3O95395 438 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 EHHADHQ08426 723 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 MTMR1Q13613 665 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 PGM5Q15124 567 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 ARHGEF16Q5VV41 709 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 ZSWIM2Q8NEG5 633 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 CCDC47Q96A33 483 aaKnown RBP11.27□□□□□ -0.61
LTN1-203ENST00000389195 DHTKD1Q96HY7 919 aaPredicted RBP11.27□□□□□ -0.61
LTN1-203ENST00000389195 FAM84AQ96KN4 292 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 MXRA8Q9BRK3 442 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 GLT8D2Q9H1C3 349 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
LTN1-203ENST00000389195 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
LTN1-203ENST00000389195 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 CYP3A4P08684 503 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 TRIM21P19474 475 aaKnown RBP11.26□□□□□ -0.61
LTN1-203ENST00000389195 HSD17B4P51659 736 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 ARID5AQ03989 594 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 TMEM63BQ5T3F8 832 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 MYCT1Q8N699 235 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 ZNF507Q8TCN5 953 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 LPAR1Q92633 364 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 FAM20AQ96MK3 541 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 KIFC3Q9BVG8 833 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 NT5C3AQ9H0P0 336 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 NLRC4Q9NPP4 1024 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 AFG3L2Q9Y4W6 797 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 DHX15O43143 795 aaKnown RBP11.26□□□□□ -0.61
LTN1-203ENST00000389195 ZBED4O75132 1171 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 CCNE2O96020 404 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 CYP27A1Q02318 531 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 GPR162Q16538 588 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 HAUS3Q68CZ6 603 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 LRRC55Q6ZSA7 311 aa11.26□□□□□ -0.61
LTN1-203ENST00000389195 APOBEC3FQ8IUX4 373 aaKnown RBP11.26□□□□□ -0.61
LTN1-203ENST00000389195 SYT2Q8N9I0 419 aaPredicted RBP11.26□□□□□ -0.61
LTN1-203ENST00000389195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.26□□□□□ -0.61
LTN1-203ENST00000389195 SLC5A5Q92911 643 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms