RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 WDR18Q9BV38 432 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 FGFBP2Q9BYJ0 223 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 ZNF341Q9BYN7 854 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 PANK4Q9NVE7 773 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 FEM1BQ9UK73 627 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 PCDHA2Q9Y5H9 948 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 ADGRG1Q9Y653 693 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 NPHP3-ACAD11A0A0J9YXS1 232 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 GOLGA6L9A6NEM1 432 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 GCOM1H8Y6P7 765 aaPredicted RBP14.19□□□□□ -0.14
GPC3-201ENST00000370818 POLR2MP0CAP2 368 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 RPS12P25398 132 aaKnown RBP14.19□□□□□ -0.14
GPC3-201ENST00000370818 RPA1P27694 616 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 INPP5BP32019 993 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 KRT9P35527 623 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 CORO7P57737 925 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 PSMC6P62333 389 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 LONRF2Q1L5Z9 754 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 ARSHQ5FYA8 562 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 FAM114A1Q8IWE2 563 aa14.19□□□□□ -0.14
GPC3-201ENST00000370818 SUGP1Q8IWZ8 645 aaKnown RBP14.19□□□□□ -0.14
GPC3-201ENST00000370818 RASSF10A6NK89 507 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 CCDC175P0C221 793 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 HOXA7P31268 230 aaPredicted RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 PTGER2P43116 358 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 SWT1Q5T5J6 900 aaKnown RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 SAMD7Q7Z3H4 446 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 GPBP1Q86WP2 473 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 LDHDQ86WU2 507 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 PPM1EQ8WY54 764 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 BMP2KQ9NSY1 1161 aaPredicted RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 BCS1LQ9Y276 419 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 A0A0U1RQJ8 604 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 ZNF76P36508 570 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 MTIF2P46199 727 aaKnown RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 GSCP56915 257 aaPredicted RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 MAP3K9P80192 1104 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 CACNB1Q02641 598 aaPredicted RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 LRRC63Q05C16 580 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 FAM26FQ5R3K3 315 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 LRRC55Q6ZSA7 311 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 TMTC1Q8IUR5 882 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 MICALL2Q8IY33 904 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 ERMNQ8TAM6 284 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 ATRIPQ8WXE1 791 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 TTYH3Q9C0H2 523 aa14.18□□□□□ -0.14
GPC3-201ENST00000370818 MRPL11Q9Y3B7 192 aaKnown RBP14.18□□□□□ -0.14
GPC3-201ENST00000370818 ZNF536O15090 1300 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 EML1O00423 815 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 MEIS1O00470 390 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 KLK7P49862 253 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 GMPSP49915 693 aaPredicted RBP14.17□□□□□ -0.14
GPC3-201ENST00000370818 TNFAIP1Q13829 316 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 KIF4BQ2VIQ3 1234 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 ZCWPW2Q504Y3 356 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 FOXR2Q6PJQ5 311 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 SLC30A10Q6XR72 485 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 RABGGTAQ92696 567 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 WDR24Q96S15 920 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 NOC4LQ9BVI4 516 aaKnown RBP14.17□□□□□ -0.14
GPC3-201ENST00000370818 VPS18Q9P253 973 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 CAPN11Q9UMQ6 739 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 UBXN2AP68543 259 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 RASSF7Q02833 373 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 TBC1D8BQ0IIM8 1120 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 MYOCDQ8IZQ8 938 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 DNAJC7Q99615 494 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 TBC1D7Q9P0N9 293 aa14.17□□□□□ -0.14
GPC3-201ENST00000370818 CCDC172P0C7W6 258 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 CYP4A11Q02928 519 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPC3-201ENST00000370818 DGKZQ13574 1117 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 CCDC65Q8IXS2 484 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 AGBL1Q96MI9 1066 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 DEFB129Q9H1M3 183 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 PDE11AQ9HCR9 933 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 CEP83Q9Y592 693 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 CCDC151A5D8V7 595 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 FZD9O00144 591 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 PSMD10O75832 226 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 BRD2P25440 801 aaKnown RBP14.16□□□□□ -0.14
GPC3-201ENST00000370818 TBC1D10BQ4KMP7 808 aaPredicted RBP14.16□□□□□ -0.14
GPC3-201ENST00000370818 CYP26C1Q6V0L0 522 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 OTOP1Q7RTM1 612 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 SYT2Q8N9I0 419 aaPredicted RBP14.16□□□□□ -0.14
GPC3-201ENST00000370818 OR8K1Q8NGG5 319 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 ERGIC2Q96RQ1 377 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 CHP1Q99653 195 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 IRX2Q9BZI1 471 aaPredicted RBP14.16□□□□□ -0.14
GPC3-201ENST00000370818 RGL1Q9NZL6 768 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 DNM3Q9UQ16 869 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 LUC7L2Q9Y383 392 aaKnown RBP14.16□□□□□ -0.14
GPC3-201ENST00000370818 ABCB11O95342 1321 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 PITPNM2Q9BZ72 1349 aa14.16□□□□□ -0.14
GPC3-201ENST00000370818 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms