RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 ATP1A1P05023 1023 aaKnown RBP9.89□□□□□ -0.83
CALD1-201ENST00000361675 PAFAH1B1P43034 410 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 VPS41P49754 854 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 USP46P62068 366 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 KLC1Q07866 573 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 ST3GAL1Q11201 340 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 DRP2Q13474 957 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 WDR93Q6P2C0 686 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 PACS1Q6VY07 963 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 BICDL1Q6ZP65 573 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 CCDC129Q6ZRS4 1044 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 NLGN1Q8N2Q7 840 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
CALD1-201ENST00000361675 CCHCR1Q8TD31 782 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 DTNBP1Q96EV8 351 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 C2orf49Q9BVC5 232 aaPredicted RBP9.89□□□□□ -0.83
CALD1-201ENST00000361675 PIF1Q9H611 641 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 NCOA5Q9HCD5 579 aaKnown RBP9.89□□□□□ -0.83
CALD1-201ENST00000361675 PCMTD2Q9NV79 361 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 SMARCAL1Q9NZC9 954 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 ASAP1Q9ULH1 1129 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 A8MUI8 341 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 FLOT1O75955 427 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 CYP1A2P05177 515 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 ENPP1P22413 925 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 FOXO4P98177 505 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 TBC1D10BQ4KMP7 808 aaPredicted RBP9.89□□□□□ -0.83
CALD1-201ENST00000361675 SLC44A4Q53GD3 710 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 LMBR1LQ6UX01 489 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 ZNF280CQ8ND82 737 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 HDAC7Q8WUI4 952 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 UBLCP1Q8WVY7 318 aaPredicted RBP9.89□□□□□ -0.83
CALD1-201ENST00000361675 DYDC2Q96IM9 177 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 HIC2Q96JB3 615 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 ELAC2Q9BQ52 826 aaKnown RBP9.89□□□□□ -0.83
CALD1-201ENST00000361675 DISC1Q9NRI5 854 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 SEPT10Q9P0V9 454 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 NFU1Q9UMS0 254 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 PLAAQ9Y263 795 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 LEMD3Q9Y2U8 911 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 MRPL42Q9Y6G3 142 aaKnown RBP9.89□□□□□ -0.83
CALD1-201ENST00000361675 GCOM1H8Y6P7 765 aaPredicted RBP9.88□□□□□ -0.83
CALD1-201ENST00000361675 TMEM127O75204 238 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 GFPT2O94808 682 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 MYZAPP0CAP1 466 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 PAK2Q13177 524 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 QPCTQ16769 361 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 CREB3L3Q68CJ9 461 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 GRAMD4Q6IC98 578 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 ZC3H18Q86VM9 953 aaKnown RBP9.88□□□□□ -0.83
CALD1-201ENST00000361675 PALB2Q86YC2 1186 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 BRSK2Q8IWQ3 736 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 TSEN2Q8NCE0 465 aaKnown RBP9.88□□□□□ -0.83
CALD1-201ENST00000361675 ANKRD49Q8WVL7 239 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 DBNDD2Q9BQY9 259 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 ARFGEF2Q9Y6D5 1785 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 KCPQ6ZWJ8 1503 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 CTNND1O60716 968 aaKnown RBP9.88□□□□□ -0.83
CALD1-201ENST00000361675 ARPC4P59998 168 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
CALD1-201ENST00000361675 MTHFD1LQ6UB35 978 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 MAP7D3Q8IWC1 876 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 OR2W6PQ8NHA6 318 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 LRRC1Q9BTT6 524 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 FSD1Q9BTV5 496 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 SAMSN1Q9NSI8 373 aaKnown RBP9.88□□□□□ -0.83
CALD1-201ENST00000361675 STIM2Q9P246 746 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 ZNF180Q9UJW8 692 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
CALD1-201ENST00000361675 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 GBP1P32455 592 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 RESTQ13127 1097 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 SMUG1Q53HV7 270 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 MIGA2Q7L4E1 593 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 PLPP6Q8IY26 295 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 NACC2Q96BF6 587 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
CALD1-201ENST00000361675 A0A0G2JLW4 131 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 CPLX1O14810 134 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 TEX33O43247 280 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 IL2RBP14784 551 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 PPM1FP49593 454 aaPredicted RBP9.87□□□□□ -0.83
CALD1-201ENST00000361675 PDE6CP51160 858 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 KCNJ2P63252 427 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 PDIA5Q14554 519 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 NECTIN1Q15223 517 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 LRRC24Q50LG9 513 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 DSTYKQ6XUX3 929 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
CALD1-201ENST00000361675 CEP70Q8NHQ1 597 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 SH3GL2Q99962 352 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 PUS3Q9BZE2 481 aaKnown RBP9.87□□□□□ -0.83
CALD1-201ENST00000361675 SYNCQ9H7C4 482 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 TSKSQ9UJT2 592 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 LUC7L2Q9Y383 392 aaKnown RBP9.87□□□□□ -0.83
CALD1-201ENST00000361675 AFDNP55196 1824 aaKnown RBP9.87□□□□□ -0.83
CALD1-201ENST00000361675 ADAMTS2O95450 1211 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 SLC4A1P02730 911 aa9.87□□□□□ -0.83
CALD1-201ENST00000361675 DNAJA1P31689 397 aaKnown RBP9.87□□□□□ -0.83
CALD1-201ENST00000361675 TUBP50607 506 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms