RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 TRIML2Q8N7C3 387 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 GRAMD1AQ96CP6 724 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 GOLGA8SH3BPF8 625 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ATP2B4P23634 1241 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 CYP2C19P33261 490 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 RWDD2BP57060 319 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 SLC39A14Q15043 492 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 NUDCD1Q96RS6 583 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 OSBPL3Q9H4L5 887 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 KIF17Q9P2E2 1029 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ABCB6Q9NP58 842 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ABCC4O15439 1325 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 TADA3O75528 432 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 MYO1FO00160 1098 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 PYGBP11216 843 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 CASP14P31944 242 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 MFAP3P55082 362 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 MAP3K7CLP57077 242 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ZNF654Q8IZM8 581 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 CDV3Q9UKY7 258 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ARHGAP31Q2M1Z3 1444 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 KPNA2P52292 529 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 DHX9Q08211 1270 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 CATSPER1Q8NEC5 780 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 CALN1Q9BXU9 219 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 SLITRK6Q9H5Y7 841 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 NRBP2Q9NSY0 501 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 SYCE1LA8MT33 242 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 WDR64B1ANS9 1081 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 CUL3Q13618 768 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ANO4Q32M45 955 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 RWDD4Q6NW29 188 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ARHGEF25Q86VW2 580 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 PODXLO00592 558 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ESRRAP11474 423 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 PCP11498 1178 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 BPIFB4P59827 614 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ZNF467Q7Z7K2 595 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 TBC1D22AQ8WUA7 517 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ARHGEF9O43307 516 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 PLS3P13797 630 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 UBXN2AP68543 259 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ZBED6P86452 979 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ZNF18P17022 549 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ATP5JP18859 108 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 C16orf87Q6PH81 154 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 FAM180AQ6UWF9 173 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 ZBTB33Q86T24 672 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 HSPH1Q92598 858 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
SPTBN1-202ENST00000356805 GMNCA6NCL1 334 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 XPOTO43592 962 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 NEK2P51955 445 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 DCAF15Q66K64 600 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 SPICE1Q8N0Z3 855 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ENAHQ8N8S7 591 aaPredicted RBP12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 PHACTR3Q96KR7 559 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 TTC25Q96NG3 672 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 STXBP3O00186 592 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 OR52Z1P0C646 297 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 OSTNP61366 133 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 SRRM1Q8IYB3 904 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 SLC7A5P2Q9GIP4 190 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 RCOR1Q9UKL0 485 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ATP8A1Q9Y2Q0 1164 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 COL4A3BPQ9Y5P4 624 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 AOC3Q16853 763 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 RNF139Q8WU17 664 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ZMYM6O95789 1325 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 KRT1P04264 644 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 SLC17A8Q8NDX2 589 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 A1BGP04217 495 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 NDUFA8P51970 172 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 AK8Q96MA6 479 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ZMYND10O75800 440 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 MIS18BP1Q6P0N0 1132 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 NEK8Q86SG6 692 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 CYTH2Q99418 400 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 HSPD1P10809 573 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms