RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 ATP8B3O60423 1300 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 CREB3O43889 395 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 IRF1P10914 325 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 BMP3P12645 472 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 OAS2P29728 719 aaKnown RBP13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 ZNF75DP51815 510 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 PASD1Q8IV76 773 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 THOC1Q96FV9 657 aaKnown RBP13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 NT5C1BQ96P26 610 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 DNAJC7Q99615 494 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 RPSAP08865 295 aaKnown RBP13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 CTSHP09668 335 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 SCG2P13521 617 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 WHAMMP3Q1A5X7 153 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 ANKRD20A4Q4UJ75 823 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 ANKRD20A8PQ5CZ79 823 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 ANKRD20A2Q5SQ80 823 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 ANKRD20A1Q5TYW2 823 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 CATSPER4Q7RTX7 472 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 NUDCD1Q96RS6 583 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 TLK1Q9UKI8 766 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 SAR1BQ9Y6B6 198 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 PRKAB2O43741 272 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 COPB2P35606 906 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 KCNJ6P48051 423 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 KDELC2Q7Z4H8 507 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 CLIC4Q9Y696 253 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 A0A087WWV3 80 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 CFAP69A5D8W1 941 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 C2CD2LO14523 706 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 ENC1O14682 589 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 MCF2LO15068 1137 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 MAP7D3Q8IWC1 876 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 SMC5Q8IY18 1101 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 MYO1FO00160 1098 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 PFKFB1P16118 471 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 EEF1DP29692 281 aaKnown RBP13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 OCRLQ01968 901 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 FAN1Q9Y2M0 1017 aa13.21□□□□□ -0.3
TRIOBP-202ENST00000344404 GFPT2O94808 682 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 CTTNQ14247 550 aaKnown RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 RNF207Q6ZRF8 634 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 CAPN7Q9Y6W3 813 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 KIF1BO60333 1816 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 MECOMQ03112 1051 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 DRP2Q13474 957 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 ME3Q16798 604 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 PIK3R2O00459 728 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 LIG3P49916 1009 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 GNGT1P63211 74 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 RAD18Q9NS91 495 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 CAPN11Q9UMQ6 739 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 DOLKQ9UPQ8 538 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 TNPO2O14787 897 aaKnown RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 CDC25AP30304 524 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 SLMAPQ14BN4 828 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 IMPG1Q17R60 797 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 PCGF5Q86SE9 256 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 SLCO1A2P46721 670 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 EFCAB13Q8IY85 973 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 THNSL1Q8IYQ7 743 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 TYW1Q9NV66 732 aaKnown RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 MLH3Q9UHC1 1453 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 HSPD1P10809 573 aaKnown RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 CRKP46108 304 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 FLOT2Q14254 428 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 RASIP1Q5U651 963 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 SCYL3Q8IZE3 742 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 THEM5Q8N1Q8 247 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 RAPGEF5Q92565 580 aa13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 ZMAT2Q96NC0 199 aaKnown RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 SAMSN1Q9NSI8 373 aaKnown RBP13.2□□□□□ -0.3
TRIOBP-202ENST00000344404 HMGB1P1B2RPK0 211 aaPredicted RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 MOCS3O95396 460 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 GOLGA5Q8TBA6 731 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 MIS12Q9H081 205 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 BTBD18B2RXH4 712 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 PBXIP1Q96AQ6 731 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 ZFYVE16Q7Z3T8 1539 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 NR2F2P24468 414 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms