RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 JAK2O60674 1132 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 ATP2B4P23634 1241 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 TSC22D1Q15714 1073 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 ARMCX5Q6P1M9 558 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 SH3BP5LQ7L8J4 393 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 AGBL1Q96MI9 1066 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 KRT25Q7Z3Z0 450 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 FGD2Q7Z6J4 655 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 MTERF3Q96E29 417 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 RTCBQ9Y3I0 505 aaKnown RBP13.78□□□□□ -0.2
USP47-202ENST00000339865 TESPA1A2RU30 521 aaPredicted RBP13.78□□□□□ -0.2
USP47-202ENST00000339865 HADHAP40939 763 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 AURKCQ9UQB9 309 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 ERICH3Q5RHP9 1530 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
USP47-202ENST00000339865 CSADQ9Y600 493 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 PGRMC1O00264 195 aaKnown RBP13.78□□□□□ -0.2
USP47-202ENST00000339865 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 NCAPG2Q86XI2 1143 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 EXOC8Q8IYI6 725 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 TRIM71Q2Q1W2 868 aaKnown RBP13.78□□□□□ -0.2
USP47-202ENST00000339865 DNAJC7Q99615 494 aa13.78□□□□□ -0.2
USP47-202ENST00000339865 TAC1P20366 129 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 CASP8Q14790 479 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 GINS4Q9BRT9 223 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 CARD9Q9H257 536 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 RTEL1Q9NZ71 1219 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 SMARCA2P51531 1590 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 CCDC195A0A1B0GUA6 201 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 PTPREP23469 700 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 MED21Q13503 144 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 LRRC8EQ6NSJ5 796 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 MLXIPLQ9NP71 852 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 LMBRD1Q9NUN5 540 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 TMA7Q9Y2S6 64 aaKnown RBP13.77□□□□□ -0.2
USP47-202ENST00000339865 MYH11P35749 1972 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 SNX2O60749 519 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 IRX1P78414 480 aaPredicted RBP13.77□□□□□ -0.2
USP47-202ENST00000339865 TCP10Q12799 353 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 ARHGEF16Q5VV41 709 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 ECT2Q9H8V3 914 aa13.77□□□□□ -0.2
USP47-202ENST00000339865 KLHL18O94889 574 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 APBA3O96018 575 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 ERFP50548 548 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 TAF1BQ53T94 588 aaPredicted RBP13.77□□□□□ -0.21
USP47-202ENST00000339865 FBXO18Q8NFZ0 1043 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 SRPK1Q96SB4 655 aaKnown RBP13.77□□□□□ -0.21
USP47-202ENST00000339865 TMEM161AQ9NX61 479 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 MYL7Q01449 175 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 AP1B1Q10567 949 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 SLC39A6Q13433 755 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 BFSP2Q13515 415 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 TEDDM1Q5T9Z0 273 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 LARGE2Q8N3Y3 721 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 OMA1Q96E52 524 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 TMCC1O94876 653 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 AP1M1Q9BXS5 423 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 KCNG1Q9UIX4 513 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 RASA4BC9J798 803 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 RASA4O43374 803 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 ATP8B1O43520 1251 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 TRIM37O94972 964 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 DEFA1P59665 94 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 DEFA3P59666 94 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 ADAM9Q13443 819 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 SLC44A4Q53GD3 710 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 TRIM69Q86WT6 500 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 PPP1R36Q96LQ0 422 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 PKD2L2Q9NZM6 624 aa13.77□□□□□ -0.21
USP47-202ENST00000339865 ARIH2O95376 493 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 SLC30A9Q6PML9 568 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 KRT77Q7Z794 578 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 ZBTB8OSQ8IWT0 167 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 PARP9Q8IXQ6 854 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 TRIML1Q8N9V2 468 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 KLHL31Q9H511 634 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 GOLGA8RI6L899 631 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 GPAA1O43292 621 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 HEATR4Q86WZ0 1026 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 PAMP19021 973 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 ST13P50502 369 aaKnown RBP13.76□□□□□ -0.21
USP47-202ENST00000339865 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 ANO4Q32M45 955 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 CENPUQ71F23 418 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 PGBD3Q8N328 593 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 DCPSQ96C86 337 aaKnown RBP13.76□□□□□ -0.21
USP47-202ENST00000339865 OTUB1Q96FW1 271 aaPredicted RBP13.76□□□□□ -0.21
USP47-202ENST00000339865 APOL6Q9BWW8 343 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 SUGCTQ9HAC7 445 aa13.76□□□□□ -0.21
USP47-202ENST00000339865 EIF3BP55884 814 aaKnown RBP13.76□□□□□ -0.21
USP47-202ENST00000339865 GCNAQ96QF7 691 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms