RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ZNF772Q68DY9 489 aaPredicted RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 ZNF668Q96K58 619 aaPredicted RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 PACSIN1Q9BY11 444 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 ARFGAP3Q9NP61 516 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 N4BP1O75113 896 aaKnown RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 ABCB4P21439 1286 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 ARHGAP25P42331 645 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 KIF11P52732 1056 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 CXCL9Q07325 125 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 KCNB1Q14721 858 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 CCDC181Q5TID7 509 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 WDR78Q5VTH9 848 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 EEPD1Q7L9B9 569 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 CERS3Q8IU89 383 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 ARHGAP20Q9P2F6 1191 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 DDX41Q9UJV9 622 aaKnown RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 A0A0U1RQG5 324 aaPredicted RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 GOLGA6L9A6NEM1 432 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 USO1O60763 962 aaKnown RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 SASH3O75995 380 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 VSNL1P62760 191 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 PHLDB2Q86SQ0 1253 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 SCFD1Q8WVM8 642 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 EIF2AK1Q9BQI3 630 aaKnown RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 KIFC3Q9BVG8 833 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 OGFRQ9NZT2 677 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 CDC23Q9UJX2 597 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 RABGAP1Q9Y3P9 1069 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 IGKV6D-41A0A0C4DH26 115 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 ZNF263O14978 683 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 KRT86O43790 486 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 SPP2Q13103 211 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 ARSHQ5FYA8 562 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 IL31RAQ8NI17 732 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
CUL4A-201ENST00000326335 WDR11Q9BZH6 1224 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 ESYT3A0FGR9 886 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 SNHG28P0DPA3 235 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
CUL4A-201ENST00000326335 DNAJC19Q96DA6 116 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 GPRC5CQ9NQ84 441 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 CASZ1Q86V15 1759 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 DDX60LQ5H9U9 1706 aaKnown RBP11.75□□□□□ -0.53
CUL4A-201ENST00000326335 EFCAB8A8MWE9 144 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 FKBP3Q00688 224 aaKnown RBP11.75□□□□□ -0.53
CUL4A-201ENST00000326335 NAA35Q5VZE5 725 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
CUL4A-201ENST00000326335 LDHDQ86WU2 507 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 ZNF507Q8TCN5 953 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 PKNOX2Q96KN3 472 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
CUL4A-201ENST00000326335 GCOM1H8Y6P7 765 aaPredicted RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 POLR2MP0CAP2 368 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.534e-6■■□□□ 13.5
CUL4A-201ENST00000326335 ODR4Q5SWX8 454 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 ERMNQ8TAM6 284 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 COG1Q8WTW3 980 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 SECISBP2LQ93073 1101 aaKnown RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 WNK4Q96J92 1243 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 WDR18Q9BV38 432 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 STK17AQ9UEE5 414 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 CAPN11Q9UMQ6 739 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 WNT10BO00744 389 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 CETN3O15182 167 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 KCNH2Q12809 1159 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 PRPF4BQ13523 1007 aaKnown RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 MTMR2Q13614 643 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 MAN2A1Q16706 1144 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 CCDC127Q96BQ5 260 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 CENPHQ9H3R5 247 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 PDE11AQ9HCR9 933 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 TMEM110-MUSTN1A8MSY1 372 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 OPLAHO14841 1288 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 PLSCR1O15162 318 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 OAS2P29728 719 aaKnown RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 ZBED6P86452 979 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 EHHADHQ08426 723 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 KLHL30Q0D2K2 578 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 BMS1Q14692 1282 aaKnown RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 ELOA2Q8IYF1 753 aaPredicted RBP11.74□□□□□ -0.53
CUL4A-201ENST00000326335 NYAP2Q9P242 653 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 SALL4Q9UJQ4 1053 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 SAR1BQ9Y6B6 198 aa11.74□□□□□ -0.53
CUL4A-201ENST00000326335 SLX4Q8IY92 1834 aa11.73□□□□□ -0.53
CUL4A-201ENST00000326335 KIAA1551Q9HCM1 1747 aa11.73□□□□□ -0.53
CUL4A-201ENST00000326335 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
CUL4A-201ENST00000326335 PLA2G4FQ68DD2 849 aa11.73□□□□□ -0.53
CUL4A-201ENST00000326335 CENPPQ6IPU0 288 aa11.73□□□□□ -0.53
CUL4A-201ENST00000326335 IFT81Q8WYA0 676 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms