RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PAIP2Q9BPZ3 127 aaKnown RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 TSGA10Q9BZW7 698 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 RIC8AQ9NPQ8 531 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 PPP1R3GB7ZBB8 358 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 SLC16A4O15374 487 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 KIAA0754O94854 1291 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 ACTN1P12814 892 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 KCNH2Q12809 1159 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 GNPTABQ3T906 1256 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 GRIPAP1Q4V328 841 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 HHIPL2Q6UWX4 724 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 ADSSL1Q8N142 457 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 PDGFDQ9GZP0 370 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 CFAP58Q5T655 872 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 ZNF746Q6NUN9 644 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 LMBR1Q8WVP7 490 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 EIF2AK1Q9BQI3 630 aaKnown RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 BPIFA3Q9BQP9 254 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 ZNRF3Q9ULT6 936 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 EFCAB8A8MWE9 144 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 RSPH10B2B2RC85 870 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 ADAMTS3O15072 1205 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 H2AFZP0C0S5 128 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 RSPH10BP0C881 870 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 PNMA6AP0CW24 399 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 SRGAP2CP0DJJ0 459 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 PPP1R7Q15435 360 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 ZNF394Q53GI3 561 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 APOBEC3HQ6NTF7 200 aaKnown RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 H2AFVQ71UI9 128 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 PROCA1Q8NCQ7 364 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 CCSER1Q9C0I3 900 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 THAP9Q9H5L6 903 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 RNF146Q9NTX7 359 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 AFPP02771 609 aaKnown RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 GYPCP04921 128 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 RHBDL3P58872 404 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 DMP1Q13316 513 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 TRPC3Q13507 836 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 MESDQ14696 234 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 LMBRD2Q68DH5 695 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 GOLPH3Q9H4A6 298 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 SMARCAL1Q9NZC9 954 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 INO80B-WBP1J3KQ70 363 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 PLEKP08567 350 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 TM4SF1P30408 202 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 SHMT1P34896 483 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 RDXP35241 583 aaKnown RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 KCTD16Q68DU8 428 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 RBM43Q6ZSC3 357 aaKnown RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 SAAL1Q96ER3 474 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 LXNQ9BS40 222 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 INO80BQ9C086 356 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 AS3MTQ9HBK9 375 aa12.04□□□□□ -0.48
TOP3A-201ENST00000321105 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-201ENST00000321105 BCRP11274 1271 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 CFAP221Q4G0U5 840 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 SRGAP1Q7Z6B7 1085 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 PANX2Q96RD6 677 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 WDR11Q9BZH6 1224 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 CHORDC1Q9UHD1 332 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 INPP5BP32019 993 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 TNNC1P63316 161 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 GUCY2DQ02846 1103 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 NR1I3Q14994 352 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 ANGEL2Q5VTE6 544 aaKnown RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 PDXDC2PQ6P474 469 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 RSBN1LQ6PCB5 846 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 PADI6Q6TGC4 694 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 OTUD6AQ7L8S5 288 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 PRPF38AQ8NAV1 312 aaKnown RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 BBXQ8WY36 941 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 KRT12Q99456 494 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 MPHOSPH6Q99547 160 aaKnown RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 SLIT3O75094 1523 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 ZBTB39O15060 712 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 GNA14O95837 355 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 APBA1Q02410 837 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 KCTD19Q17RG1 926 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 CEP55Q53EZ4 464 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 GLIS3Q8NEA6 775 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-201ENST00000321105 KMT5AQ9NQR1 393 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 RGPD2P0DJD1 1756 aa12.03□□□□□ -0.48
TOP3A-201ENST00000321105 MRC1P22897 1456 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 ZNF185O15231 689 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms