RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PURBQ96QR8 312 aaKnown RBP10.27□□□□□ -0.76
PRDM9-201ENST00000296682 GOPCQ9HD26 462 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 STK17AQ9UEE5 414 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 ADAMTS1Q9UHI8 967 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 SUGT1Q9Y2Z0 365 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 RABGAP1Q9Y3P9 1069 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 SLX4Q8IY92 1834 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 LOC285556D6RIA3 1793 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 HOXA7P31268 230 aaPredicted RBP10.27□□□□□ -0.77
PRDM9-201ENST00000296682 BAG6P46379 1132 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 BMS1Q14692 1282 aaKnown RBP10.27□□□□□ -0.77
PRDM9-201ENST00000296682 LLGL1Q15334 1064 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 ARHGAP44Q17R89 818 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 FAM133AQ8N9E0 248 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 SUPT20HQ8NEM7 779 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 ZNF577Q9BSK1 485 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 NAA15Q9BXJ9 866 aaKnown RBP10.27□□□□□ -0.77
PRDM9-201ENST00000296682 CUEDC2Q9H467 287 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 PHLPP2Q6ZVD8 1323 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 SPP2Q13103 211 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 CHURC1Q8WUH1 139 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 HOOK2Q96ED9 719 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 NYAP2Q9P242 653 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 MYO6Q9UM54 1294 aa10.27□□□□□ -0.77
PRDM9-201ENST00000296682 LOXHD1Q8IVV2 1947 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 NCK2O43639 380 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 MYL1P05976 194 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 MYBP10242 640 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 RSBN1LQ6PCB5 846 aaPredicted RBP10.26□□□□□ -0.77
PRDM9-201ENST00000296682 POTEAQ6S8J7 498 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 TMEM150BA6NC51 233 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 MEIS2O14770 477 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 EGFRP00533 1210 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 ATP1A1P05023 1023 aaKnown RBP10.26□□□□□ -0.77
PRDM9-201ENST00000296682 SNHG28P0DPA3 235 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 CASP5P51878 434 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 CXCL9Q07325 125 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 TRIM14Q14142 442 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 ODR4Q5SWX8 454 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 DCAF4Q8WV16 495 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 P2RX7Q99572 595 aaKnown RBP10.26□□□□□ -0.77
PRDM9-201ENST00000296682 OGFRQ9NZT2 677 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 CDC23Q9UJX2 597 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 SERPINA10Q9UK55 444 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 PACSIN2Q9UNF0 486 aaPredicted RBP10.26□□□□□ -0.77
PRDM9-201ENST00000296682 COL4A3BPQ9Y5P4 624 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 ARHGEF35A5YM69 484 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 SPDYE2BA6NHP3 402 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 CCDC169A6NNP5 214 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 EML1O00423 815 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 MSH4O15457 936 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 SPDYE6P0CI01 402 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 KLHL30Q0D2K2 578 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
PRDM9-201ENST00000296682 MAN2A1Q16706 1144 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 KIAA1755Q5JYT7 1200 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 LDHDQ86WU2 507 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 GSPT2Q8IYD1 628 aaKnown RBP10.26□□□□□ -0.77
PRDM9-201ENST00000296682 SLFN12Q8IYM2 578 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 ELMO3Q96BJ8 720 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 REEP2Q9BRK0 252 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 GOLPH3Q9H4A6 298 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 EHD2Q9NZN4 543 aa10.26□□□□□ -0.77
PRDM9-201ENST00000296682 ARMCX3Q9UH62 379 aaPredicted RBP10.26□□□□□ -0.77
PRDM9-201ENST00000296682 ASTN2O75129 1339 aaPredicted RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 EFCAB8A8MWE9 144 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 ZBED6P86452 979 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 PDIA5Q14554 519 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 CCDC51Q96ER9 411 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 EIF2AK1Q9BQI3 630 aaKnown RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 SAR1BQ9Y6B6 198 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 ESYT2A0FGR8 921 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 ARP10275 920 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 GCFC2P16383 781 aaKnown RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 DLK2Q6UY11 383 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 TADA3O75528 432 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 KIF20AO95235 890 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 FTCDO95954 541 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 CYP11B2P19099 503 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 ABCB4P21439 1286 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 SLC7A5Q01650 507 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 TTLL12Q14166 644 aaPredicted RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 CIAPIN1Q6FI81 312 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 STYK1Q6J9G0 422 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 GJB7Q6PEY0 223 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 ZNF662Q6ZS27 426 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 HOMEZQ8IX15 550 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 FAM178BQ8IXR5 827 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 NOA1Q8NC60 698 aaKnown RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 ZKSCAN4Q969J2 545 aaPredicted RBP10.25□□□□□ -0.77
PRDM9-201ENST00000296682 NUP58Q9BVL2 599 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 MRIQ9BWK5 157 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 CENPHQ9H3R5 247 aa10.25□□□□□ -0.77
PRDM9-201ENST00000296682 RCCD1A6NED2 376 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 EXOC3O60645 756 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 TACC1O75410 805 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms