RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 WDR18Q9BV38 432 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
CDKL3-201ENST00000265334 EML1O00423 815 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 HERVK_113P62684 666 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 TUBB2AQ13885 445 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
CDKL3-201ENST00000265334 HERC4Q5GLZ8 1057 aaPredicted RBP13.18□□□□□ -0.3
CDKL3-201ENST00000265334 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 RSRC2Q7L4I2 434 aaKnown RBP13.18□□□□□ -0.3
CDKL3-201ENST00000265334 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
CDKL3-201ENST00000265334 CCDC170Q8IYT3 715 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 FEZ1Q99689 392 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 HSD17B14Q9BPX1 270 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 TUBB2BQ9BVA1 445 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
CDKL3-201ENST00000265334 PLAGL2Q9UPG8 496 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
CDKL3-201ENST00000265334 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
CDKL3-201ENST00000265334 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
CDKL3-201ENST00000265334 PSMD10O75832 226 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 DDNO94850 711 aaPredicted RBP13.17□□□□□ -0.3
CDKL3-201ENST00000265334 CFBP00751 764 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 EPM2AIP1Q7L775 607 aaPredicted RBP13.17□□□□□ -0.3
CDKL3-201ENST00000265334 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 EDEM3Q9BZQ6 932 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
CDKL3-201ENST00000265334 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 EPHB6O15197 1021 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 KIF20AO95235 890 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 EYA4O95677 639 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 INPP5BP32019 993 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 ZNF76P36508 570 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 EDRF1Q3B7T1 1238 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 CCDC174Q6PII3 467 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 UBXN4Q92575 508 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 EIF2AK1Q9BQI3 630 aaKnown RBP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 HAUS4Q9H6D7 363 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 FBXO28Q9NVF7 368 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 CDC23Q9UJX2 597 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 TRAF5O00463 557 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 MEIS1O00470 390 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 GNA14O95837 355 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 C9orf131Q5VYM1 1079 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 LOXHD1Q8IVV2 1947 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
CDKL3-201ENST00000265334 NHEJ1Q9H9Q4 299 aaPredicted RBP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
CDKL3-201ENST00000265334 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 ZNF536O15090 1300 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 HOXD13P35453 343 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 CYLC1P35663 651 aaPredicted RBP13.15□□□□□ -0.3
CDKL3-201ENST00000265334 USP14P54578 494 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 KRT83P78385 493 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 GHRHRQ02643 423 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 B3GNT9Q6UX72 402 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 BAP1Q92560 729 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 PCMTD1Q96MG8 357 aaPredicted RBP13.15□□□□□ -0.3
CDKL3-201ENST00000265334 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 DDX41Q9UJV9 622 aaKnown RBP13.15□□□□□ -0.3
CDKL3-201ENST00000265334 TRAF3IP3Q9Y228 551 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 POLR2AP24928 1970 aaKnown RBP13.15□□□□□ -0.3
CDKL3-201ENST00000265334 CTAGE9A4FU28 777 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
CDKL3-201ENST00000265334 MUTP22033 750 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 HSD17B4P51659 736 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 CASP5P51878 434 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 RAD51AP2Q09MP3 1159 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 BMT2Q1RMZ1 405 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
CDKL3-201ENST00000265334 PARP14Q460N5 1801 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 SLITRK3O94933 977 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 LCA5LO95447 670 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 ICAM1P05362 532 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 AMPD2Q01433 879 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms