RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TC2NQ8N9U0 490 aa30.78■■■□□ 2.52
CCM2-201ENST00000258781 SYTL5Q8TDW5 730 aaPredicted RBP30.78■■■□□ 2.52
CCM2-201ENST00000258781 EML1O00423 815 aa30.77■■■□□ 2.52
CCM2-201ENST00000258781 GAS7O60861 476 aa30.77■■■□□ 2.52
CCM2-201ENST00000258781 MUTP22033 750 aa30.77■■■□□ 2.52
CCM2-201ENST00000258781 OAZ1P54368 228 aa30.77■■■□□ 2.52
CCM2-201ENST00000258781 CCAR2Q8N163 923 aaKnown RBP30.77■■■□□ 2.52
CCM2-201ENST00000258781 ZNF577Q9BSK1 485 aa30.77■■■□□ 2.52
CCM2-201ENST00000258781 VPS16Q9H269 839 aa30.77■■■□□ 2.52
CCM2-201ENST00000258781 SEMA6BQ9H3T3 888 aa30.77■■■□□ 2.52
CCM2-201ENST00000258781 FRMD3A2A2Y4 597 aa30.76■■■□□ 2.52
CCM2-201ENST00000258781 FAM26FQ5R3K3 315 aa30.76■■■□□ 2.52
CCM2-201ENST00000258781 ZNF214Q9UL59 606 aaPredicted RBP30.76■■■□□ 2.52
CCM2-201ENST00000258781 R3HCC1Q9Y3T6 440 aaKnown RBP30.76■■■□□ 2.52
CCM2-201ENST00000258781 LOXHD1Q8IVV2 1947 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 MYPNQ86TC9 1320 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 LRRC63Q05C16 580 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 PCNX4Q63HM2 1172 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 PPFIBP1Q86W92 1011 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 TRERF1Q96PN7 1200 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 RIT2Q99578 217 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 HSD17B14Q9BPX1 270 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 HOMER2Q9NSB8 354 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 AGTPBP1Q9UPW5 1226 aa30.76■■■□□ 2.51
CCM2-201ENST00000258781 ARP10275 920 aa30.75■■■□□ 2.51
CCM2-201ENST00000258781 MKRN3Q13064 507 aaKnown RBP30.75■■■□□ 2.51
CCM2-201ENST00000258781 TMEM132BQ14DG7 1078 aa30.75■■■□□ 2.51
CCM2-201ENST00000258781 TEKT3Q9BXF9 490 aa30.75■■■□□ 2.51
CCM2-201ENST00000258781 HOXC10Q9NYD6 342 aa30.75■■■□□ 2.51
CCM2-201ENST00000258781 RIPK3Q9Y572 518 aa30.75■■■□□ 2.51
CCM2-201ENST00000258781 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.75■■■□□ 2.51
CCM2-201ENST00000258781 LGALS16A8MUM7 142 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 KIF3CO14782 793 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 EYA4O95677 639 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 ARSHQ5FYA8 562 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 TMEM139Q8IV31 216 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 AKR1B15C9JRZ8 316 aaPredicted RBP30.74■■■□□ 2.51
CCM2-201ENST00000258781 KRT18P05783 430 aaKnown RBP30.74■■■□□ 2.51
CCM2-201ENST00000258781 PSMC6P62333 389 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 SNAPC2Q13487 334 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 B3GNT9Q6UX72 402 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 MYOCDQ8IZQ8 938 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 PANX2Q96RD6 677 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 UBIAD1Q9Y5Z9 338 aa30.74■■■□□ 2.51
CCM2-201ENST00000258781 IPO5O00410 1097 aaKnown RBP30.73■■■□□ 2.51
CCM2-201ENST00000258781 FGFR1OPO95684 399 aaKnown RBP30.73■■■□□ 2.51
CCM2-201ENST00000258781 ITGB5P18084 799 aa30.73■■■□□ 2.51
CCM2-201ENST00000258781 RPS6P62753 249 aaKnown RBP30.73■■■□□ 2.51
CCM2-201ENST00000258781 CYP4A11Q02928 519 aa30.73■■■□□ 2.51
CCM2-201ENST00000258781 GOLGA8FQ08AF8 430 aa30.73■■■□□ 2.51
CCM2-201ENST00000258781 GOLGA8DPQ0D2H9 430 aa30.73■■■□□ 2.51
CCM2-201ENST00000258781 PABPC4Q13310 644 aaKnown RBP eCLIP30.73■■■□□ 2.51
CCM2-201ENST00000258781 TRIM14Q14142 442 aa30.73■■■□□ 2.51
CCM2-201ENST00000258781 E4F1Q66K89 784 aaPredicted RBP30.73■■■□□ 2.51
CCM2-201ENST00000258781 GPAT2Q6NUI2 795 aa30.73■■■□□ 2.51
CCM2-201ENST00000258781 PCDHA2Q9Y5H9 948 aa30.73■■■□□ 2.51
CCM2-201ENST00000258781 ARHGAP6O43182 974 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 STX10O60499 249 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 PEX10O60683 326 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 CREBRFQ8IUR6 639 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 IL31RAQ8NI17 732 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 CNOT6LQ96LI5 555 aaKnown RBP30.72■■■□□ 2.51
CCM2-201ENST00000258781 BAG1Q99933 345 aaPredicted RBP30.72■■■□□ 2.51
CCM2-201ENST00000258781 RNF146Q9NTX7 359 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 PASKQ96RG2 1323 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 TPM2P07951 284 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 ADKP55263 362 aaKnown RBP30.72■■■□□ 2.51
CCM2-201ENST00000258781 EPHA7Q15375 998 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 SNRNP48Q6IEG0 339 aaKnown RBP30.72■■■□□ 2.51
CCM2-201ENST00000258781 RNF207Q6ZRF8 634 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 FASTKD5Q7L8L6 764 aaKnown RBP30.72■■■□□ 2.51
CCM2-201ENST00000258781 MS4A4AQ96JQ5 239 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 TSG101Q99816 390 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 ASCC2Q9H1I8 757 aaPredicted RBP30.72■■■□□ 2.51
CCM2-201ENST00000258781 RGL1Q9NZL6 768 aa30.72■■■□□ 2.51
CCM2-201ENST00000258781 NPHP3-ACAD11A0A0J9YXS1 232 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 A0A1W2PQC6 194 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 USP27XA6NNY8 438 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 ATP2A1O14983 1001 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 CCP110O43303 1012 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 KIF20AO95235 890 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 TPM1P09493 284 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 HUNKP57058 714 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 UNC45AQ9H3U1 944 aa30.71■■■□□ 2.51
CCM2-201ENST00000258781 SLITRK3O94933 977 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 UBXN1Q04323 297 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 RBL2Q08999 1139 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 GIT2Q14161 759 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 HERC4Q5GLZ8 1057 aaPredicted RBP30.7■■■□□ 2.51
CCM2-201ENST00000258781 SLC30A10Q6XR72 485 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 ZNF507Q8TCN5 953 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 NEK9Q8TD19 979 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 CCDC51Q96ER9 411 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 DYDC2Q96IM9 177 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 PRIMPOLQ96LW4 560 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 C16orf45Q96MC5 204 aaPredicted RBP30.7■■■□□ 2.51
CCM2-201ENST00000258781 TUBGCP2Q9BSJ2 902 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 MAF1Q9H063 256 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 JADE2Q9NQC1 790 aa30.7■■■□□ 2.51
CCM2-201ENST00000258781 CHMP2AO43633 222 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms