RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 NOVP48745 357 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 RBM10P98175 930 aaKnown RBP14.01□□□□□ -0.17
RFPL3-201ENST00000249007 MYSM1Q5VVJ2 828 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
RFPL3-201ENST00000249007 POF1BQ8WVV4 589 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 C16orf70Q9BSU1 422 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 SORCS3Q9UPU3 1222 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 PCDHGC5Q9Y5F6 944 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 MRPL42Q9Y6G3 142 aaKnown RBP14.01□□□□□ -0.17
RFPL3-201ENST00000249007 H3BRB1 525 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 DGKIO75912 1065 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 TOP1P11387 765 aaKnown RBP14□□□□□ -0.17
RFPL3-201ENST00000249007 EIF2AK2P19525 551 aaKnown RBP14□□□□□ -0.17
RFPL3-201ENST00000249007 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 TBC1D5Q92609 795 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 NEK1Q96PY6 1258 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 MAF1Q9H063 256 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 RNPEPQ9H4A4 650 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 TUT1Q9H6E5 874 aaKnown RBP14□□□□□ -0.17
RFPL3-201ENST00000249007 USP24Q9UPU5 2620 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
RFPL3-201ENST00000249007 FSD2A1L4K1 749 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 PER2O15055 1255 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 BRD1O95696 1058 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 PDHBP11177 359 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 CTDSPL2Q05D32 466 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 PUM1Q14671 1186 aaKnown RBP eCLIP13.99□□□□□ -0.17
RFPL3-201ENST00000249007 CELF3Q5SZQ8 465 aaKnown RBP13.99□□□□□ -0.17
RFPL3-201ENST00000249007 VN1R2Q8NFZ6 395 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 MICAL1Q8TDZ2 1067 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 ATP8B4Q8TF62 1192 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 MFSD1Q9H3U5 465 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 ANKRD11Q6UB99 2663 aaPredicted RBP13.99□□□□□ -0.17
RFPL3-201ENST00000249007 ENPP3O14638 875 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 GGPS1O95749 300 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 NR3C2P08235 984 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 GHRP10912 638 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 GNAT1P11488 350 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 ZNF543Q08ER8 600 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 FAM26DQ5JW98 314 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 CMTR2Q8IYT2 770 aaKnown RBP13.99□□□□□ -0.17
RFPL3-201ENST00000249007 KCNG4Q8TDN1 519 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 NR2E1Q9Y466 385 aa13.99□□□□□ -0.17
RFPL3-201ENST00000249007 KIAA1671Q9BY89 1806 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 PKD1L2Q7Z442 2459 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 SRGAP2BP0DMP2 458 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 CLCN5P51795 746 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 MCF2L2Q86YR7 1114 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 SIRT2Q8IXJ6 389 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 KIAA2013Q8IYS2 634 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 SETD4Q9NVD3 440 aa13.98□□□□□ -0.17
RFPL3-201ENST00000249007 ABCB11O95342 1321 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 PPFIA3O75145 1194 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 CHRNA1P02708 482 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 LGALS2P05162 132 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 KCNV1Q6PIU1 500 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 SEC62Q99442 399 aaKnown RBP13.97□□□□□ -0.17
RFPL3-201ENST00000249007 CDCA3Q99618 268 aaPredicted RBP13.97□□□□□ -0.17
RFPL3-201ENST00000249007 S1PR5Q9H228 398 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 SMOC2Q9H3U7 446 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 EHMT1Q9H9B1 1298 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 PXMP2Q9NR77 195 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 CCDC171Q6TFL3 1326 aa13.97□□□□□ -0.17
RFPL3-201ENST00000249007 ORC4O43929 436 aa13.96□□□□□ -0.17
RFPL3-201ENST00000249007 UBA1P22314 1058 aaKnown RBP13.96□□□□□ -0.17
RFPL3-201ENST00000249007 LPIN1Q14693 890 aa13.96□□□□□ -0.17
RFPL3-201ENST00000249007 DUSP6Q16828 381 aa13.96□□□□□ -0.17
RFPL3-201ENST00000249007 PAN2Q504Q3 1202 aaKnown RBP13.96□□□□□ -0.17
RFPL3-201ENST00000249007 APOL5Q9BWW9 433 aa13.96□□□□□ -0.17
RFPL3-201ENST00000249007 MLXIPQ9HAP2 919 aa13.96□□□□□ -0.17
RFPL3-201ENST00000249007 PLXNA4Q9HCM2 1894 aa13.96□□□□□ -0.17
RFPL3-201ENST00000249007 TOMM22Q9NS69 142 aa13.96□□□□□ -0.17
RFPL3-201ENST00000249007 FAM208BQ5VWN6 2430 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 LMNAP02545 664 aaKnown RBP13.95□□□□□ -0.18
RFPL3-201ENST00000249007 HSPD1P10809 573 aaKnown RBP13.95□□□□□ -0.18
RFPL3-201ENST00000249007 MYCLP12524 364 aaPredicted RBP13.95□□□□□ -0.18
RFPL3-201ENST00000249007 TECP42680 631 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 ARHGAP4P98171 946 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 SP2Q02086 613 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 ANGPT1Q15389 498 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
RFPL3-201ENST00000249007 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 FLCNQ8NFG4 579 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 PANK1Q8TE04 598 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 LRRCC1Q9C099 1032 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 KAT6AQ92794 2004 aa13.95□□□□□ -0.18
RFPL3-201ENST00000249007 NOP56O00567 594 aaKnown RBP13.94□□□□□ -0.18
RFPL3-201ENST00000249007 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 TGFB3P10600 412 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 UBE3AQ05086 875 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 GPATCH4Q5T3I0 446 aaKnown RBP13.94□□□□□ -0.18
RFPL3-201ENST00000249007 SYCE2Q6PIF2 218 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 TMEM184AQ6ZMB5 413 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 NPAS4Q8IUM7 802 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 USP26Q9BXU7 913 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms