RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 EIF2AK1Q9BQI3 630 aaKnown RBP21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 PCDHA2Q9Y5H9 948 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 CCP110O43303 1012 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 FLOT1O75955 427 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 MTIF2P46199 727 aaKnown RBP21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 SPP2Q13103 211 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 OTOP1Q7RTM1 612 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 FAM114A1Q8IWE2 563 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 CCDC65Q8IXS2 484 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 DNM3Q9UQ16 869 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 CHMP2AO43633 222 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 PSMD10O75832 226 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 KRT18P05783 430 aaKnown RBP21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 ARP10275 920 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 HSD17B4P51659 736 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 CEP55Q53EZ4 464 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 MIIPQ5JXC2 388 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 LRCH2Q5VUJ6 765 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 MYOCDQ8IZQ8 938 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 GINM1Q9NU53 330 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 RBBP6Q7Z6E9 1792 aaKnown RBP21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 KIF2AO00139 706 aaPredicted RBP21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 ZSCAN12O43309 604 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 TPM1P09493 284 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 ALAS1P13196 640 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 HERC4Q5GLZ8 1057 aaPredicted RBP21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 KIF18AQ8NI77 898 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 SLC5A5Q92911 643 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 RPAP3Q9H6T3 665 aaPredicted RBP21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 EHMT1Q9H9B1 1298 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 SLC38A10Q9HBR0 1119 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 HOMER2Q9NSB8 354 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 ABHD10Q9NUJ1 306 aa21.84■■□□□ 1.09
CHRNA4-209ENST00000627000 A0A1W2PQC6 194 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 KLK7P49862 253 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 DNM2P50570 870 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 MUM1L1Q5H9M0 696 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 DCAF15Q66K64 600 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 TRIM65Q6PJ69 517 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 SYT2Q8N9I0 419 aaPredicted RBP21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 WRNIP1Q96S55 665 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 MAP7D2Q96T17 732 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 NOC4LQ9BVI4 516 aaKnown RBP21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 ZHX3Q9H4I2 956 aa21.83■■□□□ 1.09
CHRNA4-209ENST00000627000 TTC26A0AVF1 554 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 KRT9P35527 623 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 RBM10P98175 930 aaKnown RBP21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 TRIM14Q14142 442 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 GIT2Q14161 759 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 CTTNQ14247 550 aaKnown RBP21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 LRRC55Q6ZSA7 311 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 ARHGAP27Q6ZUM4 889 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 SCYL3Q8IZE3 742 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 CCDC51Q96ER9 411 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 POLR3CQ9BUI4 534 aaPredicted RBP21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 NAA15Q9BXJ9 866 aaKnown RBP21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 GPRC5DQ9NZD1 345 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 PPP1R9AQ9ULJ8 1098 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 FRMD3A2A2Y4 597 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 ERVK-24P63145 666 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 LRRC63Q05C16 580 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 TBC1D8BQ0IIM8 1120 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 NELFCDQ8IXH7 590 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 IL31RAQ8NI17 732 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 BHMT2Q9H2M3 363 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 GGA3Q9NZ52 723 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 ZNF112Q9UJU3 913 aa21.82■■□□□ 1.08
CHRNA4-209ENST00000627000 ERCC3P19447 782 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 FECHP22830 423 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 EPS15P42566 896 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 HIRAP54198 1017 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 ZCWPW2Q504Y3 356 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 DYDC2Q96IM9 177 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 WNK4Q96J92 1243 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 HSD17B14Q9BPX1 270 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 REEP2Q9BRK0 252 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 POLD4Q9HCU8 107 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 STK24Q9Y6E0 443 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 PITPNM2Q9BZ72 1349 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 RASSF10A6NK89 507 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 FANCGO15287 622 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 GAS7O60861 476 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 ETF1P62495 437 aaKnown RBP21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 PPP2R5CQ13362 524 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 SYCP1Q15431 976 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 PIGOQ8TEQ8 1089 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 UPF1Q92900 1129 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 ZNF577Q9BSK1 485 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 BCAS3Q9H6U6 928 aa21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 MRPL44Q9H9J2 332 aaKnown RBP21.81■■□□□ 1.08
CHRNA4-209ENST00000627000 PARP14Q460N5 1801 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 A0A0U1RQJ8 604 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 SLITRK3O94933 977 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 ITGB5P18084 799 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 PTPRAP18433 802 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 BACE1P56817 501 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 SCFD1Q8WVM8 642 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 ATRIPQ8WXE1 791 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 MXRA8Q9BRK3 442 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms