RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 ALAS1P13196 640 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 H2AFXP16104 143 aaPredicted RBP28.23■■■□□ 2.11
VEGFC-202ENST00000618562 CASP14P31944 242 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.23■■■□□ 2.11
VEGFC-202ENST00000618562 LRRN4CLQ8ND94 238 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 ATG4CQ96DT6 458 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 DESI2Q9BSY9 194 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 AFG3L2Q9Y4W6 797 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 ADGRG1Q9Y653 693 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 GHRHRQ02643 423 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 STIM1Q13586 685 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 L3MBTL3Q96JM7 780 aaPredicted RBP28.22■■■□□ 2.11
VEGFC-202ENST00000618562 WDR24Q96S15 920 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 EHMT1Q9H9B1 1298 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 COL20A1Q9P218 1284 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 SNCAIPQ9Y6H5 919 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 VGLL4Q14135 290 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 MTF1Q14872 753 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 MUM1L1Q5H9M0 696 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 RAD9BQ6WBX8 426 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 KDM3AQ9Y4C1 1321 aa28.22■■■□□ 2.11
VEGFC-202ENST00000618562 EFCAB8A8MWE9 144 aa28.21■■■□□ 2.11
VEGFC-202ENST00000618562 ZBED4O75132 1171 aa28.21■■■□□ 2.11
VEGFC-202ENST00000618562 ASIC1P78348 528 aa28.21■■■□□ 2.11
VEGFC-202ENST00000618562 MAP3K9P80192 1104 aa28.21■■■□□ 2.11
VEGFC-202ENST00000618562 DPY19L2Q6NUT2 758 aa28.21■■■□□ 2.11
VEGFC-202ENST00000618562 CPLX3Q8WVH0 158 aa28.21■■■□□ 2.11
VEGFC-202ENST00000618562 HOMER2Q9NSB8 354 aa28.21■■■□□ 2.11
VEGFC-202ENST00000618562 MYMKA6NI61 221 aa28.2■■■□□ 2.11
VEGFC-202ENST00000618562 TADA3O75528 432 aa28.2■■■□□ 2.11
VEGFC-202ENST00000618562 FDX1P10109 184 aa28.2■■■□□ 2.11
VEGFC-202ENST00000618562 FXR1P51114 621 aaKnown RBP eCLIP28.2■■■□□ 2.11
VEGFC-202ENST00000618562 MCF2L2Q86YR7 1114 aa28.2■■■□□ 2.11
VEGFC-202ENST00000618562 GIMAP8Q8ND71 665 aaPredicted RBP28.2■■■□□ 2.11
VEGFC-202ENST00000618562 UBXN4Q92575 508 aa28.2■■■□□ 2.11
VEGFC-202ENST00000618562 GTPBP4Q9BZE4 634 aaKnown RBP28.2■■■□□ 2.11
VEGFC-202ENST00000618562 MRPL44Q9H9J2 332 aaKnown RBP28.2■■■□□ 2.11
VEGFC-202ENST00000618562 VAV3Q9UKW4 847 aa28.2■■■□□ 2.11
VEGFC-202ENST00000618562 COBLO75128 1261 aa28.2■■■□□ 2.1
VEGFC-202ENST00000618562 KRT26Q7Z3Y9 468 aa28.2■■■□□ 2.1
VEGFC-202ENST00000618562 NT5C3AQ9H0P0 336 aa28.2■■■□□ 2.1
VEGFC-202ENST00000618562 VPS16Q9H269 839 aa28.2■■■□□ 2.1
VEGFC-202ENST00000618562 TAB2Q9NYJ8 693 aa28.2■■■□□ 2.1
VEGFC-202ENST00000618562 MAPK8IP1Q9UQF2 711 aa28.2■■■□□ 2.1
VEGFC-202ENST00000618562 PTPRFP10586 1907 aa28.2■■■□□ 2.1
VEGFC-202ENST00000618562 PSMA7O14818 248 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 SLC26A4O43511 780 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 EEF1GP26641 437 aaKnown RBP28.19■■■□□ 2.1
VEGFC-202ENST00000618562 TMTC1Q8IUR5 882 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 THAP9Q9H5L6 903 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 CTDP1Q9Y5B0 961 aaPredicted RBP28.19■■■□□ 2.1
VEGFC-202ENST00000618562 RPTORQ8N122 1335 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 POTEB3A0JP26 581 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 POTECB2RU33 542 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 MED24O75448 989 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 POTEBQ6S5H4 581 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 MRFAP1Q9Y605 127 aa28.19■■■□□ 2.1
VEGFC-202ENST00000618562 ARHGAP29Q52LW3 1261 aa28.18■■■□□ 2.1
VEGFC-202ENST00000618562 CEP55Q53EZ4 464 aa28.18■■■□□ 2.1
VEGFC-202ENST00000618562 NCAPH2Q6IBW4 605 aa28.18■■■□□ 2.1
VEGFC-202ENST00000618562 REPS2Q8NFH8 660 aa28.18■■■□□ 2.1
VEGFC-202ENST00000618562 NOC3LQ8WTT2 800 aaKnown RBP28.18■■■□□ 2.1
VEGFC-202ENST00000618562 CCDC47Q96A33 483 aaKnown RBP28.18■■■□□ 2.1
VEGFC-202ENST00000618562 EXOC1Q9NV70 894 aa28.18■■■□□ 2.1
VEGFC-202ENST00000618562 ADAMTS5Q9UNA0 930 aa28.18■■■□□ 2.1
VEGFC-202ENST00000618562 KIAA1024Q9UPX6 916 aa28.18■■■□□ 2.1
VEGFC-202ENST00000618562 DSG3P32926 999 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 PDE4DQ08499 809 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 ILDR2Q71H61 639 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 IRF2BP1Q8IU81 584 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 ZFP91Q96JP5 570 aaPredicted RBP28.17■■■□□ 2.1
VEGFC-202ENST00000618562 CARD6Q9BX69 1037 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 ABHD10Q9NUJ1 306 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 TMOD4Q9NZQ9 345 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 PNMA2Q9UL42 364 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 PRKCSHP14314 528 aaPredicted RBP28.17■■■□□ 2.1
VEGFC-202ENST00000618562 HAUS3Q68CZ6 603 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 CATSPERGQ6ZRH7 1159 aa28.17■■■□□ 2.1
VEGFC-202ENST00000618562 USP50Q70EL3 339 aaPredicted RBP28.17■■■□□ 2.1
VEGFC-202ENST00000618562 DHTKD1Q96HY7 919 aaPredicted RBP28.17■■■□□ 2.1
VEGFC-202ENST00000618562 PPP1R12BO60237 982 aaPredicted RBP28.16■■■□□ 2.1
VEGFC-202ENST00000618562 EPHX2P34913 555 aa28.16■■■□□ 2.1
VEGFC-202ENST00000618562 PPP1R2P41236 205 aa28.16■■■□□ 2.1
VEGFC-202ENST00000618562 SH3D19Q5HYK7 790 aa28.16■■■□□ 2.1
VEGFC-202ENST00000618562 CNNM4Q6P4Q7 775 aa28.16■■■□□ 2.1
VEGFC-202ENST00000618562 SYTL5Q8TDW5 730 aaPredicted RBP28.16■■■□□ 2.1
VEGFC-202ENST00000618562 RIPK3Q9Y572 518 aa28.16■■■□□ 2.1
VEGFC-202ENST00000618562 E9PMD0 336 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 MEIS1O00470 390 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 COG2Q14746 738 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 CYP26C1Q6V0L0 522 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 DYMQ7RTS9 669 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 CATSPER3Q86XQ3 398 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 TRERF1Q96PN7 1200 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 A0A1W2PQC6 194 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 LGALS16A8MUM7 142 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 SPATA31C1P0DKV0 1188 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 STK4Q13043 487 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 IL31RAQ8NI17 732 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 ERMNQ8TAM6 284 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms