RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 DAPK3O43293 454 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 MLH1P40692 756 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 LAMC2Q13753 1193 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 COPS6Q7L5N1 327 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 IPPQ9Y573 584 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 ZNF839A8K0R7 811 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 CCT2P78371 535 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 RASSF5Q8WWW0 418 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 LZTS2Q9BRK4 669 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 FAM167BQ9BTA0 163 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 ANGEL1Q9UNK9 670 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 ABCA6Q8N139 1617 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 ACTN1P12814 892 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 ADALQ6DHV7 355 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 CYTH2Q99418 400 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 NYXQ9GZU5 481 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 EIF2S3P41091 472 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 ARMC3Q5W041 872 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 B4GALNT2Q8NHY0 566 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 TMEM60Q9H2L4 133 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 PCDHGA3Q9Y5H0 932 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 A0A1W2PQ27 194 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 A0A1W2PQ64 194 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 A0A1W2PQD8 194 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 SLC27A2O14975 620 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 E2F6O75461 281 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 SF3B3Q15393 1217 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 RCSD1Q6JBY9 416 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 KCNV2Q8TDN2 545 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 APPBP2Q92624 585 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 TAF4O00268 1085 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 IKBIPQ70UQ0 350 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 SRRM1Q8IYB3 904 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 GNB5O14775 395 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 LSM1O15116 133 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 ZPR1O75312 459 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 S100A6P06703 90 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 HNRNPH2P55795 449 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 SLC8A3P57103 927 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 IFIT1BQ5T764 474 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 BTNL9Q6UXG8 535 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 INTS13Q9NVM9 706 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 TNNI2P48788 182 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 LMBR1LQ6UX01 489 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 MDM1Q8TC05 714 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PXDNLA1KZ92 1463 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PCP4L1A6NKN8 68 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 SNPHO15079 494 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 LRRC8EQ6NSJ5 796 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 TNNI3KQ59H18 835 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 FPGT-TNNI3KV9GXZ4 949 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 IL12RB1P42701 662 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PPARDQ03181 441 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 NR5A1Q13285 461 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 CNGA3Q16281 694 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 FAM178BQ8IXR5 827 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 SLC26A6Q9BXS9 759 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 GPC4O75487 556 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PGM3O95394 542 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 EPB41P11171 864 aaKnown RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 ZNF790Q6PG37 636 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PARVAQ9NVD7 372 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 NEXMIFQ5QGS0 1516 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 CDC42BPGQ6DT37 1551 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 ESRRAP11474 423 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 MED21Q13503 144 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 TRIM25Q14258 630 aaKnown RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PATL1Q86TB9 770 aaKnown RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 CCDC162PA2VCL2 907 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 SLC10A5Q5PT55 438 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 C1orf146Q5VVC0 180 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 RBM6P78332 1123 aaKnown RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 CAPRIN1Q14444 709 aaKnown RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 KLC4Q9NSK0 619 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 INO80Q9ULG1 1556 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-211ENST00000615798 FOXO3O43524 673 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 HSP90AA4PQ58FG1 418 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PASD1Q8IV76 773 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 PHF21AQ96BD5 680 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
COL12A1-211ENST00000615798 USP6P35125 1406 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 RUNX1T1Q06455 604 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 SUZ12Q15022 739 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 MAGEF1Q9HAY2 307 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 NSMCE4AQ9NXX6 385 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 PDP2Q9P2J9 529 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 PRELID1Q9Y255 219 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 DNALI1O14645 258 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 PFDN6O15212 129 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 STRNO43815 780 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 RANBP6O60518 1105 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 POLR3DP05423 398 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 RAD23BP54727 409 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 DAB2IPQ5VWQ8 1189 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 KLHL23Q8NBE8 558 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 IGSF1Q8N6C5 1336 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 FAM25AB3EWG3 89 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 FAM25CB3EWG5 89 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms