RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 HSP90AA2PQ14568 343 aaPredicted RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 GTF2IRD2BQ6EKJ0 949 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 GTF2IRD2Q86UP8 949 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 LILRB2Q8N423 598 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 BTN2A2Q8WVV5 523 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 AARSD1Q9BTE6 412 aaKnown RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 SLC12A9Q9BXP2 914 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 NKX2-4Q9H2Z4 354 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 PAK6Q9NQU5 681 aaPredicted RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 ARHGEF4Q9NR80 690 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 GPR55Q9Y2T6 319 aaPredicted RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 IGSF1Q8N6C5 1336 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 STXBP3O00186 592 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 ADCY3O60266 1144 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 FKTNO75072 461 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 ADAMTS4O75173 837 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 VAMP4O75379 141 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 FUT4P22083 530 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 LONRF2Q1L5Z9 754 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 DPY19L1Q2PZI1 675 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 RTP2Q5QGT7 225 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 GIMAP6Q6P9H5 292 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 AGBL5Q8NDL9 886 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
VRK3-222ENST00000601324 FCRL3Q96P31 734 aaPredicted RBP6.16□□□□□ -1.42
VRK3-222ENST00000601324 MCMBPQ9BTE3 642 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 CWC22Q9HCG8 908 aaKnown RBP6.16□□□□□ -1.42
VRK3-222ENST00000601324 ZNF281Q9Y2X9 895 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 TOGARAM1Q9Y4F4 1720 aa6.16□□□□□ -1.42
VRK3-222ENST00000601324 USP54Q70EL1 1684 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 TRAV20A0A0B4J274 112 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 SCO2A0A1W2PP80 73 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 TMEM82A0PJX8 343 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 AURKAO14965 403 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 GSTM1P09488 218 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 IL2RBP14784 551 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 IFNGR1P15260 489 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 C2orf27AQ580R0 203 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 ARTNQ5T4W7 220 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 JAZF1Q86VZ6 243 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 ZBTB38Q8NAP3 1195 aaPredicted RBP6.15□□□□□ -1.42
VRK3-222ENST00000601324 SH3TC2Q8TF17 1288 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 CCDC140Q96MF4 163 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 CYP26B1Q9NR63 512 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 BACE2Q9Y5Z0 518 aa6.15□□□□□ -1.42
VRK3-222ENST00000601324 ANKRD36BQ8N2N9 1353 aa6.15□□□□□ -1.43
VRK3-222ENST00000601324 PXDNLA1KZ92 1463 aa6.15□□□□□ -1.43
VRK3-222ENST00000601324 SCG5P05408 212 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 FAM153BP0C7A2 387 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 FGFR1P11362 822 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 RPL10P27635 214 aaKnown RBP6.14□□□□□ -1.43
VRK3-222ENST00000601324 HOXC12P31275 282 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 GRIA2P42262 883 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 ZC3H12BQ5HYM0 836 aaKnown RBP6.14□□□□□ -1.43
VRK3-222ENST00000601324 EEF1DP3Q658K8 133 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 RCSD1Q6JBY9 416 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 SLC23A3Q6PIS1 610 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 SYTL4Q96C24 671 aaPredicted RBP6.14□□□□□ -1.43
VRK3-222ENST00000601324 RNPC3Q96LT9 517 aaKnown RBP6.14□□□□□ -1.43
VRK3-222ENST00000601324 ALPK1Q96QP1 1244 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 CDADC1Q9BWV3 514 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 AP5S1Q9NUS5 200 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 SLAMF8Q9P0V8 285 aa6.14□□□□□ -1.43
VRK3-222ENST00000601324 TMA7Q9Y2S6 64 aaKnown RBP6.14□□□□□ -1.43
VRK3-222ENST00000601324 TLDC2A0PJX2 215 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 C2orf71A6NGG8 1288 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 CPP00450 1065 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 SNRPB2P08579 225 aaKnown RBP6.13□□□□□ -1.43
VRK3-222ENST00000601324 RGS19P49795 217 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 SEPHS1P49903 392 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 GFRA1P56159 465 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 SCRN1Q12765 414 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 PLCL1Q15111 1095 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 TMEM67Q5HYA8 995 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 YOD1Q5VVQ6 348 aaPredicted RBP6.13□□□□□ -1.43
VRK3-222ENST00000601324 TP53INP2Q8IXH6 220 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 KCNH5Q8NCM2 988 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 ZSWIM2Q8NEG5 633 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 COPS5Q92905 334 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 CCDC120Q96HB5 630 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 FCRL2Q96LA5 508 aaPredicted RBP6.13□□□□□ -1.43
VRK3-222ENST00000601324 IER2Q9BTL4 223 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 CCNL1Q9UK58 526 aaPredicted RBP6.13□□□□□ -1.43
VRK3-222ENST00000601324 PTCH2Q9Y6C5 1203 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 MRPL42Q9Y6G3 142 aaKnown RBP6.13□□□□□ -1.43
VRK3-222ENST00000601324 TTC21BQ7Z4L5 1316 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 KIF13BQ9NQT8 1826 aa6.13□□□□□ -1.43
VRK3-222ENST00000601324 DNAJC25-GNG10A0A024R161 153 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 FGF10O15520 208 aaPredicted RBP6.12□□□□□ -1.43
VRK3-222ENST00000601324 PRODHO43272 600 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 PABPC1P11940 636 aaKnown RBP6.12□□□□□ -1.43
VRK3-222ENST00000601324 CYP4F3Q08477 520 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 MAP4K2Q12851 820 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 DUSP4Q13115 394 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 RALGPS1Q5JS13 557 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 NSMFQ6X4W1 530 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 ZPBP2Q6X784 338 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 SMIM5Q71RC9 77 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 KSR1Q8IVT5 923 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 PI4K2BQ8TCG2 481 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms