RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 SF3B2Q13435 895 aaKnown RBP24.01■■□□□ 1.43
GRAMD1A-212ENST00000600231 SAMD1Q6SPF0 538 aaPredicted RBP24.01■■□□□ 1.43
GRAMD1A-212ENST00000600231 FIGNQ5HY92 759 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 FOXR2Q6PJQ5 311 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 CHURC1Q8WUH1 139 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 VAV3Q9UKW4 847 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 ABCB11O95342 1321 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 EFCAB8A8MWE9 144 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 KRT18P05783 430 aaKnown RBP24■■□□□ 1.43
GRAMD1A-212ENST00000600231 FKBP3Q00688 224 aaKnown RBP24■■□□□ 1.43
GRAMD1A-212ENST00000600231 PABPC4Q13310 644 aaKnown RBP eCLIP24■■□□□ 1.432e-6■■■■□ 19.3
GRAMD1A-212ENST00000600231 SLC35F6Q8N357 371 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 RANBP17Q9H2T7 1088 aaKnown RBP24■■□□□ 1.43
GRAMD1A-212ENST00000600231 PGAP2Q9UHJ9 254 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 SIK3Q9Y2K2 1263 aa24■■□□□ 1.43
GRAMD1A-212ENST00000600231 IGLV3-22A0A075B6J6 115 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 SHTN1A0MZ66 631 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 TRAF5O00463 557 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 PPP2R3AQ06190 1150 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 NELFCDQ8IXH7 590 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 ZBED3Q96IU2 234 aaPredicted RBP23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 ZHX3Q9H4I2 956 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 FBXO28Q9NVF7 368 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 DNM3Q9UQ16 869 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 SPDYE4A6NLX3 237 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 CYP4A11Q02928 519 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 TRAF1Q13077 416 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 KIF4BQ2VIQ3 1234 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 SLC16A10Q8TF71 515 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 SCFD1Q8WVM8 642 aa23.99■■□□□ 1.43
GRAMD1A-212ENST00000600231 FRMD3A2A2Y4 597 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 EPHB6O15197 1021 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 SLC30A10Q6XR72 485 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 ZNHIT6Q9NWK9 470 aaKnown RBP23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 TRIM10Q9UDY6 481 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 PITPNM2Q9BZ72 1349 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 A0A1W2PQJ5 194 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 GCOM1H8Y6P7 765 aaPredicted RBP23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 EML1O00423 815 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 POLR2MP0CAP2 368 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 SYT2Q8N9I0 419 aaPredicted RBP23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 FAM207AQ9NSI2 230 aaPredicted RBP23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 EMILIN3Q9NT22 766 aa23.98■■□□□ 1.43
GRAMD1A-212ENST00000600231 H2AFXP16104 143 aaPredicted RBP23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 WDR18Q9BV38 432 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 PIM2Q9P1W9 311 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 HERVK_113P62684 666 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 UBXN2AP68543 259 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 GIT2Q14161 759 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 MMRN2Q9H8L6 949 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 NHEJ1Q9H9Q4 299 aaPredicted RBP23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 TFR2Q9UP52 801 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 COL4A3BPQ9Y5P4 624 aa23.97■■□□□ 1.43
GRAMD1A-212ENST00000600231 KCTD10Q9H3F6 313 aa23.96■■□□□ 1.43
GRAMD1A-212ENST00000600231 RGL1Q9NZL6 768 aa23.96■■□□□ 1.43
GRAMD1A-212ENST00000600231 CTAGE9A4FU28 777 aa23.95■■□□□ 1.43
GRAMD1A-212ENST00000600231 CCDC155Q8N6L0 562 aa23.95■■□□□ 1.43
GRAMD1A-212ENST00000600231 EIF2AK1Q9BQI3 630 aaKnown RBP23.95■■□□□ 1.43
GRAMD1A-212ENST00000600231 SH2D4AQ9H788 454 aa23.95■■□□□ 1.43
GRAMD1A-212ENST00000600231 MYOZ2Q9NPC6 264 aa23.95■■□□□ 1.43
GRAMD1A-212ENST00000600231 GUCA1BQ9UMX6 200 aa23.95■■□□□ 1.43
GRAMD1A-212ENST00000600231 KIF13BQ9NQT8 1826 aa23.95■■□□□ 1.43
GRAMD1A-212ENST00000600231 PLA2G6O60733 806 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 ASNSP08243 561 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 CBX1P83916 185 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 MAP3K10Q02779 954 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 CIAPIN1Q6FI81 312 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 FEZ1Q99689 392 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 REEP2Q9BRK0 252 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 MYO1AQ9UBC5 1043 aa23.95■■□□□ 1.42
GRAMD1A-212ENST00000600231 CASP5P51878 434 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 FAM160B2Q86V87 743 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 ZFP91Q96JP5 570 aaPredicted RBP23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 TANGO6Q9C0B7 1094 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 BHMT2Q9H2M3 363 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 MRPL11Q9Y3B7 192 aaKnown RBP23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 STK24Q9Y6E0 443 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 CYLC1P35663 651 aaPredicted RBP23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 CCDC40Q4G0X9 1142 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 LDHDQ86WU2 507 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 IQCDQ96DY2 449 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 EPC1Q9H2F5 836 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 HAUS4Q9H6D7 363 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 CDC23Q9UJX2 597 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 FEM1BQ9UK73 627 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 PLAGL2Q9UPG8 496 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 UTRNP46939 3433 aa23.94■■□□□ 1.42
GRAMD1A-212ENST00000600231 RASA3Q14644 834 aa23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 OTOP1Q7RTM1 612 aa23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 TEX2Q8IWB9 1127 aa23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 POLR3CQ9BUI4 534 aaPredicted RBP23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 EGFRP00533 1210 aa23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 KRT83P78385 493 aa23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 RSRC2Q7L4I2 434 aaKnown RBP23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 CCDC170Q8IYT3 715 aa23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 CEP63Q96MT8 703 aa23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 DDX41Q9UJV9 622 aaKnown RBP23.93■■□□□ 1.42
GRAMD1A-212ENST00000600231 KIF20AO95235 890 aa23.92■■□□□ 1.42
GRAMD1A-212ENST00000600231 PLEKP08567 350 aaPredicted RBP23.92■■□□□ 1.42
GRAMD1A-212ENST00000600231 CDK17Q00537 523 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms