RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 CPVLQ9H3G5 476 aa17.8■□□□□ 0.44
FOXA3-202ENST00000594297 POTEB3A0JP26 581 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 HAS3O00219 553 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 KDM4AO75164 1064 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 SNHG28P0DPA3 235 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 BECN1Q14457 450 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 HIC1Q14526 733 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 KIAA0753Q2KHM9 967 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 EPC2Q52LR7 807 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 TCEAL5Q5H9L2 206 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 POTEBQ6S5H4 581 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 TMTC2Q8N394 836 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 TBC1D5Q92609 795 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 ANKS1AQ92625 1134 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 PABPC5Q96DU9 382 aaKnown RBP17.79■□□□□ 0.44
FOXA3-202ENST00000594297 TMEM87BQ96K49 555 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 TAAR1Q96RJ0 339 aa17.79■□□□□ 0.44
FOXA3-202ENST00000594297 UPF3BQ9BZI7 483 aaKnown RBP17.79■□□□□ 0.44
FOXA3-202ENST00000594297 DAXXQ9UER7 740 aaPredicted RBP17.79■□□□□ 0.44
FOXA3-202ENST00000594297 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 ZNF318Q5VUA4 2279 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 PRC1O43663 620 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 AMHP03971 560 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 PTPROQ16827 1216 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 BANK1Q8NDB2 785 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 RGS22Q8NE09 1264 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 DBF4BQ8NFT6 615 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 SYTL5Q8TDW5 730 aaPredicted RBP17.78■□□□□ 0.44
FOXA3-202ENST00000594297 KIF2CQ99661 725 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 TCP11L1Q9NUJ3 509 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 ZSWIM5Q9P217 1185 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 MYH6P13533 1939 aa17.78■□□□□ 0.44
FOXA3-202ENST00000594297 NEDD4P46934 1319 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 EMSYQ7Z589 1322 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 GOLGA8HP0CJ92 632 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 COL19A1Q14993 1142 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 STXBP2Q15833 593 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 CDC37Q16543 378 aaPredicted RBP17.77■□□□□ 0.44
FOXA3-202ENST00000594297 EP400NLQ6ZTU2 488 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 HFE2Q6ZVN8 426 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 MB21D2Q8IYB1 491 aaPredicted RBP17.77■□□□□ 0.44
FOXA3-202ENST00000594297 EMID1Q96A84 441 aaPredicted RBP17.77■□□□□ 0.44
FOXA3-202ENST00000594297 SAMD11Q96NU1 681 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 KCNH6Q9H252 994 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 PRKAG3Q9UGI9 489 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 DDX41Q9UJV9 622 aaKnown RBP17.77■□□□□ 0.44
FOXA3-202ENST00000594297 RBM19Q9Y4C8 960 aaKnown RBP17.77■□□□□ 0.44
FOXA3-202ENST00000594297 TAF6LQ9Y6J9 622 aa17.77■□□□□ 0.44
FOXA3-202ENST00000594297 C5orf42Q9H799 3197 aa17.77■□□□□ 0.43
FOXA3-202ENST00000594297 C19orf67A6NJJ6 358 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 H3BNC9 293 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 IFIT3O14879 490 aaKnown RBP17.76■□□□□ 0.43
FOXA3-202ENST00000594297 GPM6BQ13491 265 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 SYNE3Q6ZMZ3 975 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 PPTC7Q8NI37 304 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 NSUN6Q8TEA1 469 aaKnown RBP17.76■□□□□ 0.43
FOXA3-202ENST00000594297 RMDN3Q96TC7 470 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 NSUN3Q9H649 340 aaKnown RBP17.76■□□□□ 0.43
FOXA3-202ENST00000594297 MRVI1Q9Y6F6 885 aa17.76■□□□□ 0.43
FOXA3-202ENST00000594297 ABCB11O95342 1321 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 EIF2AK2P19525 551 aaKnown RBP17.75■□□□□ 0.43
FOXA3-202ENST00000594297 IRS1P35568 1242 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 THPOP40225 353 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 EXOSC10Q01780 885 aaKnown RBP17.75■□□□□ 0.43
FOXA3-202ENST00000594297 PLEKHG4Q58EX7 1191 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 RPAINQ86UA6 219 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 FBXO11Q86XK2 927 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 ADHFE1Q8IWW8 467 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 DHX37Q8IY37 1157 aaKnown RBP17.75■□□□□ 0.43
FOXA3-202ENST00000594297 SNX27Q96L92 541 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 ZSCAN10Q96SZ4 725 aaPredicted RBP17.75■□□□□ 0.43
FOXA3-202ENST00000594297 YME1L1Q96TA2 773 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 UBA5Q9GZZ9 404 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 CLDND1Q9NY35 253 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 FAM50BQ9Y247 325 aa17.75■□□□□ 0.43
FOXA3-202ENST00000594297 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 SORBS3O60504 671 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 HOXD8P13378 290 aaPredicted RBP17.74■□□□□ 0.43
FOXA3-202ENST00000594297 LAMC2Q13753 1193 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 WTAPQ15007 396 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 GPATCH4Q5T3I0 446 aaKnown RBP17.74■□□□□ 0.43
FOXA3-202ENST00000594297 Q6ZUG5 572 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 SERINC5Q86VE9 423 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 TMEM192Q8IY95 271 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
FOXA3-202ENST00000594297 TTC14Q96N46 770 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 IWS1Q96ST2 819 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 OSBPL7Q9BZF2 842 aa17.74■□□□□ 0.43
FOXA3-202ENST00000594297 CCDC69A6NI79 296 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 UPP2O95045 317 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 CPA1P15085 419 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 LTBRP36941 435 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 LIFRP42702 1097 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 CYB5R4Q7L1T6 521 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 FBXL16Q8N461 479 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms