RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 PLA2G6O60733 806 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 HERVK_113P62684 666 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 TRAF1Q13077 416 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 NIM1KQ8IY84 436 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 SLC35F6Q8N357 371 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 FEZ1Q99689 392 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
MBD1-227ENST00000592060 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 CDK17Q00537 523 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 TSR1Q2NL82 804 aaKnown RBP17.48■□□□□ 0.39
MBD1-227ENST00000592060 RSRC2Q7L4I2 434 aaKnown RBP17.48■□□□□ 0.39
MBD1-227ENST00000592060 ZC3H3Q8IXZ2 948 aaKnown RBP17.48■□□□□ 0.39
MBD1-227ENST00000592060 UBXN4Q92575 508 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 CAP2P40123 477 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 PSMC6P62333 389 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
MBD1-227ENST00000592060 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 ZNF662Q6ZS27 426 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 CYP2W1Q8TAV3 490 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 PCMTD1Q96MG8 357 aaPredicted RBP17.48■□□□□ 0.39
MBD1-227ENST00000592060 KCTD10Q9H3F6 313 aa17.48■□□□□ 0.39
MBD1-227ENST00000592060 EPHB6O15197 1021 aa17.47■□□□□ 0.39
MBD1-227ENST00000592060 HNRNPH3P31942 346 aaKnown RBP17.47■□□□□ 0.39
MBD1-227ENST00000592060 FKBP3Q00688 224 aaKnown RBP17.47■□□□□ 0.39
MBD1-227ENST00000592060 SYT2Q8N9I0 419 aaPredicted RBP17.47■□□□□ 0.39
MBD1-227ENST00000592060 SLC16A10Q8TF71 515 aa17.47■□□□□ 0.39
MBD1-227ENST00000592060 CHURC1Q8WUH1 139 aa17.47■□□□□ 0.39
MBD1-227ENST00000592060 SCFD1Q8WVM8 642 aa17.47■□□□□ 0.39
MBD1-227ENST00000592060 CEP63Q96MT8 703 aa17.47■□□□□ 0.39
MBD1-227ENST00000592060 TBC1D7Q9P0N9 293 aa17.47■□□□□ 0.39
MBD1-227ENST00000592060 DDX41Q9UJV9 622 aaKnown RBP17.47■□□□□ 0.39
MBD1-227ENST00000592060 CXCL9Q07325 125 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 DEFB132Q7Z7B7 95 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 FAM160B2Q86V87 743 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 TBC1D5Q92609 795 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 POLR3CQ9BUI4 534 aaPredicted RBP17.46■□□□□ 0.39
MBD1-227ENST00000592060 WDR18Q9BV38 432 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 CDC23Q9UJX2 597 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 COL4A3BPQ9Y5P4 624 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 CTAGE9A4FU28 777 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 CYLC1P35663 651 aaPredicted RBP17.46■□□□□ 0.39
MBD1-227ENST00000592060 BAG6P46379 1132 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 TUBB2AQ13885 445 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 GIT2Q14161 759 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 HERC4Q5GLZ8 1057 aaPredicted RBP17.46■□□□□ 0.39
MBD1-227ENST00000592060 MIGA2Q7L4E1 593 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 CCDC170Q8IYT3 715 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 TUBB2BQ9BVA1 445 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 GLIS2Q9BZE0 524 aaPredicted RBP17.46■□□□□ 0.39
MBD1-227ENST00000592060 HAUS4Q9H6D7 363 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 SH2D4AQ9H788 454 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 NHEJ1Q9H9Q4 299 aaPredicted RBP17.46■□□□□ 0.39
MBD1-227ENST00000592060 ZNHIT6Q9NWK9 470 aaKnown RBP17.46■□□□□ 0.39
MBD1-227ENST00000592060 TRIM10Q9UDY6 481 aa17.46■□□□□ 0.39
MBD1-227ENST00000592060 EIF3CLB5ME19 914 aaKnown RBP17.45■□□□□ 0.38
MBD1-227ENST00000592060 GCOM1H8Y6P7 765 aaPredicted RBP17.45■□□□□ 0.38
MBD1-227ENST00000592060 EML1O00423 815 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 MEIS1O00470 390 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 CFBP00751 764 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 ZNF76P36508 570 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 MARSP56192 900 aaKnown RBP17.45■□□□□ 0.38
MBD1-227ENST00000592060 RAD51AP2Q09MP3 1159 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 PABPC4Q13310 644 aaKnown RBP eCLIP17.45■□□□□ 0.38
MBD1-227ENST00000592060 EIF3CQ99613 913 aaKnown RBP17.45■□□□□ 0.38
MBD1-227ENST00000592060 NAPGQ99747 312 aaPredicted RBP17.45■□□□□ 0.38
MBD1-227ENST00000592060 ZNF446Q9NWS9 450 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 DNM3Q9UQ16 869 aa17.45■□□□□ 0.38
MBD1-227ENST00000592060 TRAF5O00463 557 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 WNT10BO00744 389 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 CLCN6P51797 869 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 KRT83P78385 493 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 ZYXQ15942 572 aaKnown RBP17.44■□□□□ 0.38
MBD1-227ENST00000592060 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
MBD1-227ENST00000592060 NELFCDQ8IXH7 590 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 EIF2AK1Q9BQI3 630 aaKnown RBP17.44■□□□□ 0.38
MBD1-227ENST00000592060 REEP2Q9BRK0 252 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 EMILIN3Q9NT22 766 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 OGFRQ9NZT2 677 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 FEM1BQ9UK73 627 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 PLAGL2Q9UPG8 496 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 MRPL11Q9Y3B7 192 aaKnown RBP17.44■□□□□ 0.38
MBD1-227ENST00000592060 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 KIF20AO95235 890 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 KRT18P05783 430 aaKnown RBP17.44■□□□□ 0.38
MBD1-227ENST00000592060 NBPF9Q3BBW0 867 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 EPM2AIP1Q7L775 607 aaPredicted RBP17.44■□□□□ 0.38
MBD1-227ENST00000592060 BAP1Q92560 729 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 SLC5A5Q92911 643 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 FAM207AQ9NSI2 230 aaPredicted RBP17.44■□□□□ 0.38
MBD1-227ENST00000592060 FBXO28Q9NVF7 368 aa17.44■□□□□ 0.38
MBD1-227ENST00000592060 SHTN1A0MZ66 631 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 PSMD10O75832 226 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 EYA4O95677 639 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 GNA14O95837 355 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 CASP5P51878 434 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 AMPD2Q01433 879 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 CYP4A11Q02928 519 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 KCNMA1Q12791 1236 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms