RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 PDHA1P08559 390 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 ALADP13716 330 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 CNGA4Q8IV77 575 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 ITM2BQ9Y287 266 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 LSM1O15116 133 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 KRT14P02533 472 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 HDAC4P56524 1084 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 ZNF268Q14587 947 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 LZICQ8WZA0 190 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 ANKRD27Q96NW4 1050 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 MPHOSPH6Q99547 160 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 A0A087X0B3 334 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 GMNCA6NCL1 334 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 CCDC166P0CW27 439 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 SP100P23497 879 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 MECOMQ03112 1051 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 SLC15A3Q8IY34 581 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 TRAPPC9Q96Q05 1148 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 RPS6KC1Q96S38 1066 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.37□□□□□ -0.271e-7■□□□□ 11.2
SMARCA4-217ENST00000591595 OXCT1P55809 520 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 USP46P62068 366 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 PHEXP78562 749 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 QPCTQ16769 361 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 EMC10Q5UCC4 262 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 TMEM154Q6P9G4 183 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 NAA15Q9BXJ9 866 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 LNPEPQ9UIQ6 1025 aa13.37□□□□□ -0.27
SMARCA4-217ENST00000591595 EIF3FO00303 357 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 MFAP3LO75121 409 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 PCK1P35558 622 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 MOV10L1Q9BXT6 1211 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 TAB2Q9NYJ8 693 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 ADD3Q9UEY8 706 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 CFAP73A6NFT4 308 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 SUPT3HO75486 399 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 RFC5P40937 340 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 FXR1P51114 621 aaKnown RBP eCLIP13.36□□□□□ -0.273e-6■■■□□ 17.4
SMARCA4-217ENST00000591595 CCNG1P51959 295 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 EARS2Q5JPH6 523 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
SMARCA4-217ENST00000591595 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 SMIM22K7EJ46 135 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 CDC25AP30304 524 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 CLCN2P51788 898 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 GSDMAQ96QA5 445 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 SLF1Q9BQI6 1058 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 VCX3BQ9H321 246 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 VCX3AQ9NNX9 186 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 ATRNO75882 1429 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 PLEKHA8P1O95397 391 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 MCM7P33993 719 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 PTGDRQ13258 359 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 TTC38Q5R3I4 469 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 EXOC3L1Q86VI1 746 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 RPGRIP1Q96KN7 1286 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 ZIM3Q96PE6 472 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 DLGAP2Q9P1A6 1054 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 KRT9P35527 623 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 NLRP5P59047 1200 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 BYSLQ13895 437 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 TSR1Q2NL82 804 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 PPP4R3AQ6IN85 833 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 VCXQ9H320 206 aa13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 TTF2Q9UNY4 1162 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-217ENST00000591595 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 MAGEB6P1A0A0J9YX57 407 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 USO1O60763 962 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 STIP1P31948 543 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 PLOD1Q02809 727 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 GKAP1Q5VSY0 366 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 TCERG1LQ5VWI1 586 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 PIK3AP1Q6ZUJ8 805 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 TAF4BQ92750 862 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 hCG_2014768A0A024R1R8 64 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms