RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 DRD2P14416 443 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 SDSP20132 328 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 DGKGP49619 791 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 LBX1P52954 281 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 NFKB2Q00653 900 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 CT47A1Q5JQC4 288 aaPredicted RBP9.69□□□□□ -0.86
ATG4D-210ENST00000588972 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 ACAD11Q709F0 780 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 DYMQ7RTS9 669 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 OSBP2Q969R2 916 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 TARS2Q9BW92 718 aaKnown RBP9.69□□□□□ -0.86
ATG4D-210ENST00000588972 ZNF541Q9H0D2 1346 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 GBP3Q9H0R5 595 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 PIDD1Q9HB75 910 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 MIS18AQ9NYP9 233 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 HACL1Q9UJ83 578 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 A0A0A0MRY4 1105 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 APAF1O14727 1248 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 SHOXO15266 292 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 RNGTTO60942 597 aaKnown RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 TIAF1O95411 115 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 HSPA8P11142 646 aaKnown RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 HOXB4P17483 251 aaPredicted RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 BRDTQ58F21 947 aaPredicted RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 NBPF12Q5TAG4 269 aaPredicted RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 NSMFQ6X4W1 530 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 ADAT2Q7Z6V5 191 aaKnown RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 PNMA8AQ86V59 439 aaPredicted RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 LRRTM3Q86VH5 581 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 FAM9BQ8IZU0 186 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 BVESQ8NE79 360 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 ABHD8Q96I13 439 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 CEP89Q96ST8 783 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 MKRN2Q9H000 416 aaKnown RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 INTS7Q9NVH2 962 aaKnown RBP9.68□□□□□ -0.86
ATG4D-210ENST00000588972 WHRNQ9P202 907 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 LAMB4A4D0S4 1761 aa9.68□□□□□ -0.86
ATG4D-210ENST00000588972 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 DNAJC25-GNG10A0A024R161 153 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 NPR1P16066 1061 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 CD247P20963 164 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 EPHX2P34913 555 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 EXOSC10Q01780 885 aaKnown RBP9.67□□□□□ -0.86
ATG4D-210ENST00000588972 MAP2K1Q02750 393 aaPredicted RBP9.67□□□□□ -0.86
ATG4D-210ENST00000588972 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 C7orf61Q8IZ16 206 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 MRGPRX3Q96LB0 322 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 ZNF277Q9NRM2 450 aaPredicted RBP9.67□□□□□ -0.86
ATG4D-210ENST00000588972 MAGEC2Q9UBF1 373 aaPredicted RBP9.67□□□□□ -0.86
ATG4D-210ENST00000588972 MCM8Q9UJA3 840 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 SUGT1Q9Y2Z0 365 aa9.67□□□□□ -0.86
ATG4D-210ENST00000588972 TERTO14746 1132 aaKnown RBP9.66□□□□□ -0.86
ATG4D-210ENST00000588972 PPM1BO75688 479 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 A1BGP04217 495 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 C6orf222P0C671 652 aaPredicted RBP9.66□□□□□ -0.86
ATG4D-210ENST00000588972 ASPAP45381 313 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 RAC1P63000 192 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 TAF7Q15545 349 aaPredicted RBP9.66□□□□□ -0.86
ATG4D-210ENST00000588972 DEFB115Q30KQ5 88 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 TRIM61Q5EBN2 209 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 CNNM4Q6P4Q7 775 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 CLEC4GQ6UXB4 293 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 NBPF5PQ86XG9 351 aaPredicted RBP9.66□□□□□ -0.86
ATG4D-210ENST00000588972 RTKN2Q8IZC4 609 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 AFAP1L2Q8N4X5 818 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 DNAJB8Q8NHS0 232 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 VWCEQ96DN2 955 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 SSU72Q9NP77 194 aaKnown RBP9.66□□□□□ -0.86
ATG4D-210ENST00000588972 FAM105AQ9NUU6 356 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 ABT1Q9ULW3 272 aaKnown RBP9.66□□□□□ -0.86
ATG4D-210ENST00000588972 FAN1Q9Y2M0 1017 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 ACTL7BQ9Y614 415 aa9.66□□□□□ -0.86
ATG4D-210ENST00000588972 WDR33Q9C0J8 1336 aaKnown RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 PRAMEF22A3QJZ6 481 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 KLRG2A4D1S0 409 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 DNAJC8O75937 253 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 LRIG2O94898 1065 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 CELA2BP08218 269 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 PMLP29590 882 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 IARSP41252 1262 aaKnown RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 LMOD3Q0VAK6 560 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 AUHQ13825 339 aaKnown RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 TRIM59Q8IWR1 403 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 SMYD4Q8IYR2 804 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 CNTROBQ8N137 903 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 GPC2Q8N158 579 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 MFSD2AQ8NA29 543 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 C12orf50Q8NA57 414 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 C2CD4AQ8NCU7 369 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 RCC1LQ96I51 464 aaKnown RBP9.65□□□□□ -0.86
ATG4D-210ENST00000588972 GP6Q9HCN6 339 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 SFMBT1Q9UHJ3 866 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 CEP131Q9UPN4 1083 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms