RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 RIPOR3Q96MK2 946 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 PUS7LQ9H0K6 701 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 MKNK2Q9HBH9 465 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 INCENPQ9NQS7 918 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 ARPP21Q9UBL0 812 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 ADD3Q9UEY8 706 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 CCPG1Q9ULG6 757 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 PRR12Q9ULL5 1215 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 MYH7BA7E2Y1 1941 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 PLIN4Q96Q06 1357 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 HAS3O00219 553 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 PLA2G6O60733 806 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 GLP2RO95838 553 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 TTLL1O95922 423 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 RB1P06400 928 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 MCCP23508 829 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 ICAM3P32942 547 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 BMPR1AP36894 532 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 NDUFV1P49821 464 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 PTPN21Q16825 1174 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 KCTD1Q719H9 257 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 TMEM57Q8N5G2 664 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 CLUAP1Q96AJ1 413 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 GMCL1Q96IK5 515 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 ALG1Q9BT22 464 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 PHF7Q9BWX1 381 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 RC3H2Q9HBD1 1191 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 IL1RAPL2Q9NP60 686 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 EXOC6BQ9Y2D4 811 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 USP15Q9Y4E8 981 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 GTF3C3Q9Y5Q9 886 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 PLXNA4Q9HCM2 1894 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 FRYLO94915 3013 aa9.13□□□□□ -0.95
SMARCE1-217ENST00000580654 EMSYQ7Z589 1322 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 GSG1L2A8MUP6 293 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 MINDY4BA8MYZ0 360 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 MMP1P03956 469 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 ICAM1P05362 532 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 ARP10275 920 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 DNAJB1P25685 340 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 SLC1A4P43007 532 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 PDE4DQ08499 809 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 LAPTM4AQ15012 233 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 UBE3CQ15386 1083 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 CLEC4DQ8WXI8 215 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 DDRGK1Q96HY6 314 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 RPGRIP1Q96KN7 1286 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 C11orf84Q9BUA3 381 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 RANBP17Q9H2T7 1088 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 PAG1Q9NWQ8 432 aa9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 ISY1Q9ULR0 285 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 BARX2Q9UMQ3 279 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-217ENST00000580654 PTPDC1A2A3K4 754 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 RSPH10B2B2RC85 870 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 F2P00734 622 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 RSPH10BP0C881 870 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 CALML3P27482 149 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 RBM10P98175 930 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 PDE4BQ07343 736 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 IKQ13123 557 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 MFSD10Q14728 455 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 LY6KQ17RY6 165 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 RCSD1Q6JBY9 416 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 DGLUCYQ7Z3D6 616 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 FIBCD1Q8N539 461 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 EFHBQ8N7U6 833 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 C7orf31Q8N865 590 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 SUSD6Q92537 303 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 IL17RAQ96F46 866 aa9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 STRBPQ96SI9 672 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 EPB41L4AQ9HCS5 686 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 ANKRD11Q6UB99 2663 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-217ENST00000580654 MAP1BP46821 2468 aaKnown RBP9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 USP24Q9UPU5 2620 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 EP300Q09472 2414 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 MYO10Q9HD67 2058 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 ZNF286BP0CG31 522 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 CASTP20810 708 aaKnown RBP9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 THPOP40225 353 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 RPS6P62753 249 aaKnown RBP9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 KIAA0753Q2KHM9 967 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 TTBK2Q6IQ55 1244 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 RNF207Q6ZRF8 634 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 CHST3Q7LGC8 479 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 SERINC5Q86VE9 423 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 ZNF444Q8N0Y2 327 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 ZNF454Q8N9F8 522 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 RHPN1Q8TCX5 695 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 SEPT8Q92599 483 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 BOLA2Q9H3K6 86 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 PLAGL2Q9UPG8 496 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 PCDHGC5Q9Y5F6 944 aa9.1□□□□□ -0.95
SMARCE1-217ENST00000580654 ADGRA3Q8IWK6 1321 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 CEP250Q9BV73 2442 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 GH1P01241 217 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 ATF7P17544 494 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 SLC16A2P36021 539 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms