RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 EARS2Q5JPH6 523 aaKnown RBP10.52□□□□□ -0.73
CCDC40-212ENST00000574799 ENAHQ8N8S7 591 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-212ENST00000574799 ZNF579Q8NAF0 562 aaKnown RBP10.52□□□□□ -0.73
CCDC40-212ENST00000574799 HOOK2Q96ED9 719 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 BATF3Q9NR55 127 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 SNED1Q8TER0 1413 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 CEP104O60308 925 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 NMT2O60551 498 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 ANP32DO95626 131 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 NEFHP12036 1026 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 EIF4A3P38919 411 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 MAGOHP61326 146 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 PRPF4BQ13523 1007 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 NT5DC1Q5TFE4 455 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 HAUS3Q68CZ6 603 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 PARD3BQ8TEW8 1205 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 MAGOHBQ96A72 148 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 CD2APQ9Y5K6 639 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 PSME4Q14997 1843 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 FAM237AA0A1B0GTK4 181 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 ZNF233A6NK53 670 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 GTPBP6O43824 516 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 EPB41P11171 864 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 PBX1P40424 430 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 KIF11P52732 1056 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 MXRA7P84157 204 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 ATP11AP98196 1134 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 PSMD2Q13200 908 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 GLE1Q53GS7 698 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 RCSD1Q6JBY9 416 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 KCNV2Q8TDN2 545 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 WHAMMQ8TF30 809 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 PYM1Q9BRP8 204 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 NSRP1Q9H0G5 558 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 CAPN11Q9UMQ6 739 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 GLI1P08151 1106 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 RWDD2BP57060 319 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 ASIC1P78348 528 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 GPSM2P81274 684 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 ZNF658Q5TYW1 1059 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 CREG2Q8IUH2 290 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 BRIP1Q9BX63 1249 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 DCP1AQ9NPI6 582 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 NLRC4Q9NPP4 1024 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 BAZ2BQ9UIF8 2168 aaKnown RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 GGT7Q9UJ14 662 aa10.51□□□□□ -0.73
CCDC40-212ENST00000574799 V9GY48 417 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-212ENST00000574799 KLK7P49862 253 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 DPYDQ12882 1025 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 PPP4R3AQ6IN85 833 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 PIK3AP1Q6ZUJ8 805 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 ROBO3Q96MS0 1386 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 STK36Q9NRP7 1315 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 ZC3H4Q9UPT8 1303 aaKnown RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 MAGEB6P1A0A0J9YX57 407 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 DNM1LO00429 736 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 KCNK3O14649 394 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 ATP6V1G2O95670 118 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 PLEKP08567 350 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 IFNAR1P17181 557 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 SLC8A3P57103 927 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 PPP2R2AP63151 447 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 TROAPQ12815 778 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 GRAPQ13588 217 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 TAF11Q15544 211 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 ARMC9Q7Z3E5 817 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 GRAPLQ8TC17 118 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 TSC22D3Q99576 134 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 ELAC2Q9BQ52 826 aaKnown RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 LRP2BPQ9P2M1 347 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 ABCF2Q9UG63 623 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 EEF1GP26641 437 aaKnown RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 WLSQ5T9L3 541 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 C15orf52Q6ZUT6 534 aaKnown RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 APTXQ7Z2E3 356 aaKnown RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 PROCA1Q8NCQ7 364 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 KLHL29Q96CT2 875 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 DPH5Q9H2P9 285 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 IL17RBQ9NRM6 502 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 PACSIN2Q9UNF0 486 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-212ENST00000574799 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 LEMD3Q9Y2U8 911 aa10.5□□□□□ -0.73
CCDC40-212ENST00000574799 TRIM37O94972 964 aa10.49□□□□□ -0.73
CCDC40-212ENST00000574799 GNAT2P19087 354 aa10.49□□□□□ -0.73
CCDC40-212ENST00000574799 TRAPPC3LQ5T215 181 aa10.49□□□□□ -0.73
CCDC40-212ENST00000574799 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
CCDC40-212ENST00000574799 ELOA2Q8IYF1 753 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-212ENST00000574799 UHMK1Q8TAS1 419 aaKnown RBP10.49□□□□□ -0.73
CCDC40-212ENST00000574799 CNOT6LQ96LI5 555 aaKnown RBP10.49□□□□□ -0.73
CCDC40-212ENST00000574799 KRT23Q9C075 422 aa10.49□□□□□ -0.73
CCDC40-212ENST00000574799 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
CCDC40-212ENST00000574799 POLLQ9UGP5 575 aa10.49□□□□□ -0.73
CCDC40-212ENST00000574799 ATXN2Q99700 1313 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms