RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 RPA1P27694 616 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 PSMC6P62333 389 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 DGKZQ13574 1117 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
USP43-205ENST00000574408 AGBL1Q96MI9 1066 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 WDR18Q9BV38 432 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 VAV3Q9UKW4 847 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 CCPG1Q9ULG6 757 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 DNM3Q9UQ16 869 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 ABCB11O95342 1321 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 SPATA31C1P0DKV0 1188 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 LRRC63Q05C16 580 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 SYCP1Q15431 976 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
USP43-205ENST00000574408 TSG101Q99816 390 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 FGFBP2Q9BYJ0 223 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 MRPL44Q9H9J2 332 aaKnown RBP11.63□□□□□ -0.55
USP43-205ENST00000574408 ZNF215Q9UL58 517 aaPredicted RBP11.63□□□□□ -0.55
USP43-205ENST00000574408 ADGRG1Q9Y653 693 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 SLC12A3P55017 1021 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 GNG11P61952 73 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 ERVK-24P63145 666 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 TMTC1Q8IUR5 882 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 DEFB129Q9H1M3 183 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 LUC7L2Q9Y383 392 aaKnown RBP11.62□□□□□ -0.55
USP43-205ENST00000574408 EML1O00423 815 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 CHMP2AO43633 222 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 ERCC3P19447 782 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 TRIM21P19474 475 aaKnown RBP11.62□□□□□ -0.55
USP43-205ENST00000574408 PTGER2P43116 358 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 PRELPP51888 382 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 KIF4BQ2VIQ3 1234 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 CPXCR1Q8N123 301 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 HOOK2Q96ED9 719 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 SLF1Q9BQI6 1058 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 RGL1Q9NZL6 768 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 CD2APQ9Y5K6 639 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
USP43-205ENST00000574408 WDR46O15213 610 aaKnown RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 FGFR1OPO95684 399 aaKnown RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 KLK7P49862 253 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 ARSHQ5FYA8 562 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 FKBP15Q5T1M5 1219 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 LRCH2Q5VUJ6 765 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 TEX2Q8IWB9 1127 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 NELFCDQ8IXH7 590 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 EIF2AK1Q9BQI3 630 aaKnown RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 TANGO6Q9C0B7 1094 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 ICAM1P05362 532 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 FECHP22830 423 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 HOXA7P31268 230 aaPredicted RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 CEP55Q53EZ4 464 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 CYP26C1Q6V0L0 522 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 LRRC55Q6ZSA7 311 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 PRPF38AQ8NAV1 312 aaKnown RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 LZTFL1Q9NQ48 299 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 FANCGO15287 622 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 CTNND1O60716 968 aaKnown RBP11.61□□□□□ -0.55
USP43-205ENST00000574408 OR8K1Q8NGG5 319 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 LPAR1Q92633 364 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 BHMT2Q9H2M3 363 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 PRDM4Q9UKN5 801 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
USP43-205ENST00000574408 A0A0U1RQJ8 604 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 FZD9O00144 591 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 TRAF5O00463 557 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 FLOT1O75955 427 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 SLU7O95391 586 aaKnown RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 TSR1Q2NL82 804 aaKnown RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 SYT2Q8N9I0 419 aaPredicted RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 ATRIPQ8WXE1 791 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 WDR24Q96S15 920 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 HOMER2Q9NSB8 354 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 CAPN11Q9UMQ6 739 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 ZNF536O15090 1300 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 NFIBO00712 420 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 POLR3GO15318 223 aaPredicted RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 GAS7O60861 476 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 ALAS1P13196 640 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 MTMR2Q13614 643 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 CTTNQ14247 550 aaKnown RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 PRAMEF18Q5VWM3 479 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 CHP1Q99653 195 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 POLR3CQ9BUI4 534 aaPredicted RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 L2HGDHQ9H9P8 463 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 PCDHA2Q9Y5H9 948 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 URI1O94763 535 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms