RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ARMC2Q8NEN0 867 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 LRRC15Q8TF66 581 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 PANK4Q9NVE7 773 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 GOLGA6L10A6NI86 522 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 ERVK-9P63128 1117 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 GRIK5Q16478 980 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 CFAP221Q4G0U5 840 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 FAM133BQ5BKY9 247 aaKnown RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 MIIPQ5JXC2 388 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 IFIT1BQ5T764 474 aaKnown RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 EMC10Q5UCC4 262 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 BZW1Q7L1Q6 419 aaKnown RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 MICAL1Q8TDZ2 1067 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 CUL5Q93034 780 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 RSRC1Q96IZ7 334 aaKnown RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 ALS2CR12Q96Q35 445 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 CTNNA1P35221 906 aaKnown RBP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 MAGOHP61326 146 aaKnown RBP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 IRX1P78414 480 aaPredicted RBP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 EHHADHQ08426 723 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 DRP2Q13474 957 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 THEMIS2Q5TEJ8 643 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 RRAGAQ7L523 313 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 PRCCQ92733 491 aaPredicted RBP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 MAGOHBQ96A72 148 aaKnown RBP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 PHF20Q9BVI0 1012 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 C6orf229H3BNL8 230 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 EEF1GP26641 437 aaKnown RBP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 SLC8A1P32418 973 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 NPY5RQ15761 445 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 CD302Q8IX05 232 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 UBLCP1Q8WVY7 318 aaPredicted RBP17.89■□□□□ 0.45
LINC00554-201ENST00000564841 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
LINC00554-201ENST00000564841 PALMO75781 387 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 UFL1O94874 794 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 TNFRSF8P28908 595 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 ATP2C1P98194 919 aaPredicted RBP17.88■□□□□ 0.45
LINC00554-201ENST00000564841 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 NAALADL2Q58DX5 795 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 TSGA10Q9BZW7 698 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 YIPF3Q9GZM5 350 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 ANKRD2Q9GZV1 360 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 CPVLQ9H3G5 476 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 FAM170AA1A519 330 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 LRRC53A6NM62 1247 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 H0YGN5 161 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 APBA3O96018 575 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 FCER1AP12319 257 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 PRLRP16471 622 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 TMED8Q6PL24 325 aaPredicted RBP17.88■□□□□ 0.45
LINC00554-201ENST00000564841 FBXO33Q7Z6M2 555 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 ZNF570Q96NI8 536 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 FAM167BQ9BTA0 163 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 MTFR1LQ9H019 292 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00554-201ENST00000564841 NFS1Q9Y697 457 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 COL5A3P25940 1745 aaPredicted RBP17.88■□□□□ 0.45
LINC00554-201ENST00000564841 DIAPH2O60879 1101 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 SPDYE1Q8NFV5 336 aaPredicted RBP17.88■□□□□ 0.45
LINC00554-201ENST00000564841 AGAP11Q8TF27 550 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 TATDN2Q93075 761 aa17.88■□□□□ 0.45
LINC00554-201ENST00000564841 A8MUI8 341 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 GKAP1Q5VSY0 366 aaPredicted RBP17.87■□□□□ 0.45
LINC00554-201ENST00000564841 CCDC50Q8IVM0 306 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 SPICE1Q8N0Z3 855 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 PROM2Q8N271 834 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 NSUN4Q96CB9 384 aaKnown RBP17.87■□□□□ 0.45
LINC00554-201ENST00000564841 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
LINC00554-201ENST00000564841 GGA2Q9UJY4 613 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 PPIP5K2O43314 1243 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 ECHS1P30084 290 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 STK4Q13043 487 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 ARMC3Q5W041 872 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 AP1M1Q9BXS5 423 aa17.87■□□□□ 0.45
LINC00554-201ENST00000564841 KLRC4O43908 158 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 GPSM2P81274 684 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 GRAPQ13588 217 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 ZKSCAN8Q15776 578 aaPredicted RBP17.86■□□□□ 0.45
LINC00554-201ENST00000564841 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
LINC00554-201ENST00000564841 MAGEC3Q8TD91 643 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 ZSCAN10Q96SZ4 725 aaPredicted RBP17.86■□□□□ 0.45
LINC00554-201ENST00000564841 THAP9Q9H5L6 903 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 FBXL5Q9UKA1 691 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 PLAGL2Q9UPG8 496 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 TRPC6Q9Y210 931 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 PSMA7O14818 248 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 GNAT2P19087 354 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 DRD4P21917 467 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 ESR2Q92731 530 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 NLRC4Q9NPP4 1024 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 RMND1Q9NWS8 449 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 MCM9Q9NXL9 1143 aa17.86■□□□□ 0.45
LINC00554-201ENST00000564841 HGSO14964 777 aaPredicted RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 HSPA9P38646 679 aaKnown RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 NLRP5P59047 1200 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 PPP2R2AP63151 447 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms