RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ARHGAP25P42331 645 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 ZBED6P86452 979 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 WDR59Q6PJI9 974 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 IQCDQ96DY2 449 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 AGPAT5Q9NUQ2 364 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 REXO2Q9Y3B8 237 aaKnown RBP18.35■□□□□ 0.53
CCNF-204ENST00000564333 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 KCNA3P22001 575 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 TRAF1Q13077 416 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 ZCWPW2Q504Y3 356 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 NIM1KQ8IY84 436 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 FAM20AQ96MK3 541 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 NDST4Q9H3R1 872 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 NPHP3-ACAD11A0A0J9YXS1 232 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 SLC12A3P55017 1021 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 FKBP1CQ5VVH2 108 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 SLC35F6Q8N357 371 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 GOLGA1Q92805 767 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 FGFBP2Q9BYJ0 223 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 TMEM39BQ9GZU3 492 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 ZNHIT6Q9NWK9 470 aaKnown RBP18.34■□□□□ 0.53
CCNF-204ENST00000564333 MYO1AQ9UBC5 1043 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 STK24Q9Y6E0 443 aa18.34■□□□□ 0.53
CCNF-204ENST00000564333 MSH4O15457 936 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.53
CCNF-204ENST00000564333 CYP3A4P08684 503 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.53
CCNF-204ENST00000564333 CATSPER3Q86XQ3 398 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 CCDC125Q86Z20 511 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 CDAN1Q8IWY9 1227 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 AGBL3Q8NEM8 1001 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 VPS33BQ9H267 617 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 TBC1D7Q9P0N9 293 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 VAV3Q9UKW4 847 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 ZNRF3Q9ULT6 936 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 PCDHA2Q9Y5H9 948 aa18.33■□□□□ 0.53
CCNF-204ENST00000564333 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 FRMD3A2A2Y4 597 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 TBC1D12O60347 775 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 RPA1P27694 616 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 CYLC1P35663 651 aaPredicted RBP18.33■□□□□ 0.52
CCNF-204ENST00000564333 ZNF76P36508 570 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 CCDC174Q6PII3 467 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 RSRC2Q7L4I2 434 aaKnown RBP18.33■□□□□ 0.52
CCNF-204ENST00000564333 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 MTMR14Q8NCE2 650 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 RANBP17Q9H2T7 1088 aaKnown RBP18.33■□□□□ 0.52
CCNF-204ENST00000564333 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 VCPKMTQ9H867 229 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 ARFGAP3Q9NP61 516 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.33■□□□□ 0.52
CCNF-204ENST00000564333 SIK3Q9Y2K2 1263 aa18.33■□□□□ 0.52
CCNF-204ENST00000564333 CTAGE9A4FU28 777 aa18.32■□□□□ 0.52
CCNF-204ENST00000564333 ABL1P00519 1130 aa18.32■□□□□ 0.52
CCNF-204ENST00000564333 HERVK_113P62684 666 aa18.32■□□□□ 0.52
CCNF-204ENST00000564333 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
CCNF-204ENST00000564333 FAM83AQ86UY5 434 aa18.32■□□□□ 0.52
CCNF-204ENST00000564333 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
CCNF-204ENST00000564333 SPATA31C1P0DKV0 1188 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
CCNF-204ENST00000564333 RAD51AP2Q09MP3 1159 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 BRD3Q15059 726 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 ZYXQ15942 572 aaKnown RBP18.31■□□□□ 0.52
CCNF-204ENST00000564333 HERC4Q5GLZ8 1057 aaPredicted RBP18.31■□□□□ 0.52
CCNF-204ENST00000564333 CEP112Q8N8E3 955 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 NAPGQ99747 312 aaPredicted RBP18.31■□□□□ 0.52
CCNF-204ENST00000564333 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 MEIS1O00470 390 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 CFBP00751 764 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 TUBBP07437 444 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 KRT83P78385 493 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 CCDC40Q4G0X9 1142 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 ARSHQ5FYA8 562 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 MIGA2Q7L4E1 593 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 NELFCDQ8IXH7 590 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 CCDC170Q8IYT3 715 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 CEP63Q96MT8 703 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 HAUS4Q9H6D7 363 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 DNM3Q9UQ16 869 aa18.31■□□□□ 0.52
CCNF-204ENST00000564333 FER1L6Q2WGJ9 1857 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 IGLV3-22A0A075B6J6 115 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
CCNF-204ENST00000564333 TRAF5O00463 557 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 POLR2MP0CAP2 368 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 CAP2P40123 477 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 PLA2G4AP47712 749 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 PSMC6P62333 389 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 CDK17Q00537 523 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCNF-204ENST00000564333 CCDC84Q86UT8 332 aaPredicted RBP18.3■□□□□ 0.52
CCNF-204ENST00000564333 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 SYT2Q8N9I0 419 aaPredicted RBP18.3■□□□□ 0.52
CCNF-204ENST00000564333 CYP2W1Q8TAV3 490 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 SCFD1Q8WVM8 642 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 ZHX3Q9H4I2 956 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
CCNF-204ENST00000564333 FAM207AQ9NSI2 230 aaPredicted RBP18.3■□□□□ 0.52
CCNF-204ENST00000564333 TRIM10Q9UDY6 481 aa18.3■□□□□ 0.52
CCNF-204ENST00000564333 CDC23Q9UJX2 597 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms