RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TTC26A0AVF1 554 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 CTNND1O60716 968 aaKnown RBP21.26■□□□□ 0.99
SMPD3-203ENST00000563226 KRT9P35527 623 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 DNM2P50570 870 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 MYOCDQ8IZQ8 938 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 ZNF710Q8N1W2 664 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 HOOK2Q96ED9 719 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 EIF2AK1Q9BQI3 630 aaKnown RBP21.26■□□□□ 0.99
SMPD3-203ENST00000563226 RGL1Q9NZL6 768 aa21.26■□□□□ 0.99
SMPD3-203ENST00000563226 A0A0U1RQJ8 604 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 NFIBO00712 420 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 MTMR2Q13614 643 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 LRRC55Q6ZSA7 311 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 TEX2Q8IWB9 1127 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 CCDC65Q8IXS2 484 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 ATRIPQ8WXE1 791 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 LPAR1Q92633 364 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 NOC4LQ9BVI4 516 aaKnown RBP21.25■□□□□ 0.99
SMPD3-203ENST00000563226 COL20A1Q9P218 1284 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 DNAI1Q9UI46 699 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 RASSF10A6NK89 507 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 OTOP1Q7RTM1 612 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 PRPF38AQ8NAV1 312 aaKnown RBP21.25■□□□□ 0.99
SMPD3-203ENST00000563226 CLEC4DQ8WXI8 215 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 EMILIN3Q9NT22 766 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 DNM3Q9UQ16 869 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 ADGRG1Q9Y653 693 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 PARP14Q460N5 1801 aa21.25■□□□□ 0.99
SMPD3-203ENST00000563226 FRMD3A2A2Y4 597 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 CHMP2AO43633 222 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 PSMD10O75832 226 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 LRRC63Q05C16 580 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 ZCWPW2Q504Y3 356 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 HERC4Q5GLZ8 1057 aaPredicted RBP21.24■□□□□ 0.99
SMPD3-203ENST00000563226 LRCH2Q5VUJ6 765 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 CPXCR1Q8N123 301 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 SYT2Q8N9I0 419 aaPredicted RBP21.24■□□□□ 0.99
SMPD3-203ENST00000563226 TRPM4Q8TD43 1214 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 SLC5A5Q92911 643 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 TANGO6Q9C0B7 1094 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 KRT18P05783 430 aaKnown RBP21.24■□□□□ 0.99
SMPD3-203ENST00000563226 ARP10275 920 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 VCAM1P19320 739 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 HSD17B4P51659 736 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 TBC1D8BQ0IIM8 1120 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 SYCP1Q15431 976 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 CEP55Q53EZ4 464 aa21.24■□□□□ 0.99
SMPD3-203ENST00000563226 POLR3CQ9BUI4 534 aaPredicted RBP21.24■□□□□ 0.99
SMPD3-203ENST00000563226 RAVER2Q9HCJ3 691 aaKnown RBP21.24■□□□□ 0.99
SMPD3-203ENST00000563226 ERCC3P19447 782 aa21.23■□□□□ 0.99
SMPD3-203ENST00000563226 GIT2Q14161 759 aa21.23■□□□□ 0.99
SMPD3-203ENST00000563226 CTTNQ14247 550 aaKnown RBP21.23■□□□□ 0.99
SMPD3-203ENST00000563226 NAA30Q147X3 362 aaPredicted RBP21.23■□□□□ 0.99
SMPD3-203ENST00000563226 ANGEL2Q5VTE6 544 aaKnown RBP21.23■□□□□ 0.99
SMPD3-203ENST00000563226 NELFCDQ8IXH7 590 aa21.23■□□□□ 0.99
SMPD3-203ENST00000563226 REEP2Q9BRK0 252 aa21.23■□□□□ 0.99
SMPD3-203ENST00000563226 TTYH3Q9C0H2 523 aa21.23■□□□□ 0.99
SMPD3-203ENST00000563226 ZHX3Q9H4I2 956 aa21.23■□□□□ 0.99
SMPD3-203ENST00000563226 PITPNM2Q9BZ72 1349 aa21.23■□□□□ 0.99
SMPD3-203ENST00000563226 CCDC175P0C221 793 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 IL31RAQ8NI17 732 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 SCFD1Q8WVM8 642 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 ZKSCAN4Q969J2 545 aaPredicted RBP21.22■□□□□ 0.99
SMPD3-203ENST00000563226 EHMT1Q9H9B1 1298 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 SLC38A10Q9HBR0 1119 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 PHLPP2Q6ZVD8 1323 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 FLOT1O75955 427 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 ALAS1P13196 640 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 HOXA7P31268 230 aaPredicted RBP21.22■□□□□ 0.99
SMPD3-203ENST00000563226 CASP5P51878 434 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 MUM1L1Q5H9M0 696 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 ACRBPQ8NEB7 543 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 DYDC2Q96IM9 177 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 CHP1Q99653 195 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 HSD17B14Q9BPX1 270 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 BHMT2Q9H2M3 363 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 BCAS3Q9H6U6 928 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 HOMER2Q9NSB8 354 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 CAPN11Q9UMQ6 739 aa21.22■□□□□ 0.99
SMPD3-203ENST00000563226 TUBB4AP04350 444 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 SPP2Q13103 211 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 PPP2R5CQ13362 524 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 TMTC1Q8IUR5 882 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 WDR24Q96S15 920 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 TSG101Q99816 390 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 RUSC1Q9BVN2 902 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 RPAP3Q9H6T3 665 aaPredicted RBP21.21■□□□□ 0.99
SMPD3-203ENST00000563226 POLD4Q9HCU8 107 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 GINM1Q9NU53 330 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 AGPAT5Q9NUQ2 364 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 ZNF215Q9UL58 517 aaPredicted RBP21.21■□□□□ 0.99
SMPD3-203ENST00000563226 STK24Q9Y6E0 443 aa21.21■□□□□ 0.99
SMPD3-203ENST00000563226 GOLGA6L9A6NEM1 432 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 RSPH10B2B2RC85 870 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 RSPH10BP0C881 870 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 VWA3BQ502W6 1294 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 PIGOQ8TEQ8 1089 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 WNK4Q96J92 1243 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 ZNF577Q9BSK1 485 aa21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms