RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 TRAF5O00463 557 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 MSH4O15457 936 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 SRGAP2O75044 1071 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 CYP4A11Q02928 519 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 KCNMA1Q12791 1236 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 BMS1Q14692 1282 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 HERC4Q5GLZ8 1057 aaPredicted RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 FAM83BQ5T0W9 1011 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 NOA1Q8NC60 698 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 TSG101Q99816 390 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 ZNHIT6Q9NWK9 470 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 CNTNAP1P78357 1384 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 EIF3CLB5ME19 914 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 PSMD14O00487 310 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 TBC1D8O95759 1140 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 CYLC1P35663 651 aaPredicted RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 MMP14P50281 582 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 ZYXQ15942 572 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 CCDC84Q86UT8 332 aaPredicted RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 SLFN12Q8IYM2 578 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 CEP112Q8N8E3 955 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 BAP1Q92560 729 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 EIF3CQ99613 913 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 TANGO6Q9C0B7 1094 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 ZNF277Q9NRM2 450 aaPredicted RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 MYO6Q9UM54 1294 aa15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-220ENST00000542922 MACROD2A1Z1Q3 448 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 EML1O00423 815 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 UBXN2AP68543 259 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 Q4G0T1 1027 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 BTNL9Q6UXG8 535 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 RRAGAQ7L523 313 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 CCDC65Q8IXS2 484 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 ZBTB9Q96C00 473 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 KCTD10Q9H3F6 313 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 ZNF70Q9UC06 446 aaPredicted RBP15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 VAV3Q9UKW4 847 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
SLC3A2-220ENST00000542922 RGPD3A6NKT7 1758 aaPredicted RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RGPD4Q7Z3J3 1758 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RSPH10B2B2RC85 870 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 KRT18P05783 430 aaKnown RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RHOXF2BP0C7M4 288 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RSPH10BP0C881 870 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 KRT83P78385 493 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 DMTNQ08495 405 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 CCDC40Q4G0X9 1142 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RSBN1LQ6PCB5 846 aaPredicted RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 TRAPPC11Q7Z392 1133 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RHOXF2Q9BQY4 288 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 CRACR2AQ9BSW2 395 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 GLIS2Q9BZE0 524 aaPredicted RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 PLAGL2Q9UPG8 496 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 ABCB11O95342 1321 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 FRMD3A2A2Y4 597 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 FGFR1OPO95684 399 aaKnown RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 POLD1P28340 1107 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RXRBP28702 533 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 EIF4A3P38919 411 aaKnown RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 FKBP3Q00688 224 aaKnown RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 GIT2Q14161 759 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 MIGA2Q7L4E1 593 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 CCDC170Q8IYT3 715 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 REEP2Q9BRK0 252 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 TMEM39BQ9GZU3 492 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 NLRC4Q9NPP4 1024 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RGL1Q9NZL6 768 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 RBBP6Q7Z6E9 1792 aaKnown RBP15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 MYH10P35580 1976 aa15.15■□□□□ 0.02
SLC3A2-220ENST00000542922 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 HOXD13P35453 343 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 CDK17Q00537 523 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 WHAMMP3Q1A5X7 153 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 HAUS3Q68CZ6 603 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 SFR1Q86XK3 245 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 CCDC42Q96M95 316 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 MLXIPQ9HAP2 919 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 EMILIN3Q9NT22 766 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 IGLV3-22A0A075B6J6 115 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 NOL4O94818 638 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 CFBP00751 764 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 RPA1P27694 616 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 STAT2P52630 851 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 KIF11P52732 1056 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 CAPZA3Q96KX2 299 aa15.14■□□□□ 0.01
SLC3A2-220ENST00000542922 PURBQ96QR8 312 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms