RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 SH3RF3Q8TEJ3 882 aaPredicted RBP4.47□□□□□ -1.69
SEC23A-202ENST00000537403 LARP4BQ92615 738 aaKnown RBP4.47□□□□□ -1.69
SEC23A-202ENST00000537403 ATP6V0A1Q93050 837 aa4.47□□□□□ -1.69
SEC23A-202ENST00000537403 GSDMAQ96QA5 445 aa4.47□□□□□ -1.69
SEC23A-202ENST00000537403 WDR11Q9BZH6 1224 aa4.47□□□□□ -1.69
SEC23A-202ENST00000537403 FTOQ9C0B1 505 aaKnown RBP eCLIP4.47□□□□□ -1.69
SEC23A-202ENST00000537403 FAM204AQ9H8W3 233 aa4.47□□□□□ -1.69
SEC23A-202ENST00000537403 METTL14Q9HCE5 456 aaKnown RBP4.47□□□□□ -1.69
SEC23A-202ENST00000537403 POLR3EQ9NVU0 708 aa4.47□□□□□ -1.69
SEC23A-202ENST00000537403 MYO1AQ9UBC5 1043 aa4.47□□□□□ -1.69
SEC23A-202ENST00000537403 ARIH1Q9Y4X5 557 aaPredicted RBP4.47□□□□□ -1.69
SEC23A-202ENST00000537403 SPEF2Q9C093 1822 aa4.47□□□□□ -1.69
SEC23A-202ENST00000537403 LAD1O00515 517 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 PPP6R2O75170 966 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 ATP2C2O75185 946 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 SLC34A2O95436 690 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 FERP16591 822 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 YARSP54577 528 aaKnown RBP4.46□□□□□ -1.69
SEC23A-202ENST00000537403 EMP3P54852 163 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 RPS6KA1Q15418 735 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 DNAJC21Q5F1R6 531 aaKnown RBP4.46□□□□□ -1.69
SEC23A-202ENST00000537403 SYDE2Q5VT97 1194 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 TMEM179Q6ZVK1 233 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 PEX26Q7Z412 305 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 PPM1KQ8N3J5 372 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 GPT2Q8TD30 523 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 C7orf43Q8WVR3 580 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 SLC7A3Q8WY07 619 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 TRERF1Q96PN7 1200 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 LSM14BQ9BX40 385 aaKnown RBP4.46□□□□□ -1.69
SEC23A-202ENST00000537403 IFIH1Q9BYX4 1025 aaKnown RBP4.46□□□□□ -1.69
SEC23A-202ENST00000537403 TRIM31Q9BZY9 425 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 NACA2Q9H009 215 aa4.46□□□□□ -1.69
SEC23A-202ENST00000537403 STMN4Q9H169 189 aaPredicted RBP4.46□□□□□ -1.69
SEC23A-202ENST00000537403 RPAP1Q9BWH6 1393 aaPredicted RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 ACTN4O43707 911 aaKnown RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 P4HA1P13674 534 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 ABCB4P21439 1286 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 DMP1Q13316 513 aaPredicted RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 C6orf132Q5T0Z8 1188 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 SPOUT1Q5T280 376 aaKnown RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 GBP6Q6ZN66 633 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 EEPD1Q7L9B9 569 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 FAM160B2Q86V87 743 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 TICAM2Q86XR7 235 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 PROCA1Q8NCQ7 364 aaPredicted RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 SLC44A5Q8NCS7 719 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 KIAA1524Q8TCG1 905 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 U2AF1L4Q8WU68 220 aaKnown RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 POMGNT1Q8WZA1 660 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 ERO1AQ96HE7 468 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 AK8Q96MA6 479 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 SELENOSQ9BQE4 189 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 FAM196BA6NMK8 535 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 E7EVH7 732 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 ZEB2O60315 1214 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 ZMYND10O75800 440 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 TMEM191BP0C7N4 346 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 EIF2AK2P19525 551 aaKnown RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 IREB2P48200 963 aaKnown RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 NT5C2P49902 561 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 ZBTB16Q05516 673 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 CDC37Q16543 378 aaPredicted RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 FAM160B1Q5W0V3 765 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 SEPT14Q6ZU15 432 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 GPR161Q8N6U8 529 aaKnown RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 IQCDQ96DY2 449 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 SLC10A4Q96EP9 437 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 CCDC51Q96ER9 411 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 CDHR1Q96JP9 859 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 FAM84BQ96KN1 310 aaPredicted RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 ZNF341Q9BYN7 854 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 CUEDC2Q9H467 287 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 KCNK9Q9NPC2 374 aa4.46□□□□□ -1.7
SEC23A-202ENST00000537403 DCP1AQ9NPI6 582 aaPredicted RBP4.46□□□□□ -1.7
SEC23A-202ENST00000537403 PASKQ96RG2 1323 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 hCG_1984214I3L0E3 225 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 INO80B-WBP1J3KQ70 363 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 HNRNPDLO14979 420 aaKnown RBP4.45□□□□□ -1.7
SEC23A-202ENST00000537403 PLEKHA8P1O95397 391 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 SLFN14P0C7P3 912 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 HSPA6P17066 643 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 POLR2FP61218 127 aaKnown RBP4.45□□□□□ -1.7
SEC23A-202ENST00000537403 YWHAEP62258 255 aaKnown RBP4.45□□□□□ -1.7
SEC23A-202ENST00000537403 TUBB2AQ13885 445 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 RASA3Q14644 834 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 UBE2SQ16763 222 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 AOC3Q16853 763 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 CCDC14Q49A88 953 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 DAAM2Q86T65 1068 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 ZNF713Q8N859 430 aaPredicted RBP4.45□□□□□ -1.7
SEC23A-202ENST00000537403 RBM46Q8TBY0 533 aaKnown RBP4.45□□□□□ -1.7
SEC23A-202ENST00000537403 FBF1Q8TES7 1133 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 IPO4Q8TEX9 1081 aaKnown RBP4.45□□□□□ -1.7
SEC23A-202ENST00000537403 UBLCP1Q8WVY7 318 aaPredicted RBP4.45□□□□□ -1.7
SEC23A-202ENST00000537403 CEP170P1Q96L14 293 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 NACC1Q96RE7 527 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 MMS19Q96T76 1030 aa4.45□□□□□ -1.7
SEC23A-202ENST00000537403 TMEM47Q9BQJ4 181 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms