RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNRF3Q9ULT6 936 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 TERF2Q15554 542 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 MEA1Q16626 185 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 TSR1Q2NL82 804 aaKnown RBP14.84□□□□□ -0.03
VPS33B-202ENST00000535906 ZCWPW2Q504Y3 356 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 FKBP15Q5T1M5 1219 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 HAUS3Q68CZ6 603 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 EPC1Q9H2F5 836 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 CDC23Q9UJX2 597 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 MEIS1O00470 390 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 SLC26A4O43511 780 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 CFBP00751 764 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 HOXA7P31268 230 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-202ENST00000535906 ZBED6P86452 979 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 CCDC174Q6PII3 467 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 SRGAP1Q7Z6B7 1085 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 PKNOX2Q96KN3 472 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 FAM20AQ96MK3 541 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 GLIS2Q9BZE0 524 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-202ENST00000535906 MYO1AQ9UBC5 1043 aa14.84□□□□□ -0.03
VPS33B-202ENST00000535906 SCAF8Q9UPN6 1271 aaKnown RBP14.84□□□□□ -0.03
VPS33B-202ENST00000535906 TBC1D12O60347 775 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CYP3A4P08684 503 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 RPA1P27694 616 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CXCL9Q07325 125 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 MAN2A1Q16706 1144 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 NBPF9Q3BBW0 867 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 HERC4Q5GLZ8 1057 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-202ENST00000535906 FKBP1CQ5VVH2 108 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CCDC65Q8IXS2 484 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 NIM1KQ8IY84 436 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 MTMR14Q8NCE2 650 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 AGBL3Q8NEM8 1001 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 SIK3Q9Y2K2 1263 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 IGLV3-22A0A075B6J6 115 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CTAGE9A4FU28 777 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 WNT10BO00744 389 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CAP2P40123 477 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 PLA2G4AP47712 749 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 FIGNQ5HY92 759 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CC2D1AQ6P1N0 951 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-202ENST00000535906 FOXR2Q6PJQ5 311 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-202ENST00000535906 SLC35F6Q8N357 371 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 CEP112Q8N8E3 955 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 TSG101Q99816 390 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 VCPKMTQ9H867 229 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 TRIM10Q9UDY6 481 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 PGAP2Q9UHJ9 254 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 VAV3Q9UKW4 847 aa14.83□□□□□ -0.04
VPS33B-202ENST00000535906 ABCB11O95342 1321 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 SHTN1A0MZ66 631 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 FRMD3A2A2Y4 597 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 EPHB6O15197 1021 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 ZNF76P36508 570 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 CHMP4BP1P59074 171 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 PABPC4Q13310 644 aaKnown RBP eCLIP14.82□□□□□ -0.046e-11■■■■□ 25.6
VPS33B-202ENST00000535906 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-202ENST00000535906 SLC30A10Q6XR72 485 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 FAM83AQ86UY5 434 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 NELFCDQ8IXH7 590 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 ERMNQ8TAM6 284 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 PARD6BQ9BYG5 372 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 VPS33BQ9H267 617 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 RANBP17Q9H2T7 1088 aaKnown RBP14.82□□□□□ -0.04
VPS33B-202ENST00000535906 TFR2Q9UP52 801 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 KIF13BQ9NQT8 1826 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 A0A1W2PQJ5 194 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 TRAF5O00463 557 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 SEC31AO94979 1220 aaKnown RBP14.82□□□□□ -0.04
VPS33B-202ENST00000535906 HERVK_113P62684 666 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 FKBP3Q00688 224 aaKnown RBP14.82□□□□□ -0.04
VPS33B-202ENST00000535906 CYP4A11Q02928 519 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 KIF4BQ2VIQ3 1234 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 CHURC1Q8WUH1 139 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 SCFD1Q8WVM8 642 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 ZBED3Q96IU2 234 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-202ENST00000535906 FAM207AQ9NSI2 230 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-202ENST00000535906 FBXO28Q9NVF7 368 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 ZHX1Q9UKY1 873 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-202ENST00000535906 DNM3Q9UQ16 869 aa14.82□□□□□ -0.04
VPS33B-202ENST00000535906 PITPNM2Q9BZ72 1349 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 EML1O00423 815 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 KRT18P05783 430 aaKnown RBP14.81□□□□□ -0.04
VPS33B-202ENST00000535906 BAG6P46379 1132 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 FAM193AP78312 1265 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 GIT2Q14161 759 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 CCDC155Q8N6L0 562 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 SYT2Q8N9I0 419 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-202ENST00000535906 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 ZHX3Q9H4I2 956 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 NHEJ1Q9H9Q4 299 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-202ENST00000535906 ST7Q9NRC1 585 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 EMILIN3Q9NT22 766 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 TUBB4BP68371 445 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 UBXN2AP68543 259 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 ZNF771Q7L3S4 317 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-202ENST00000535906 NAPGQ99747 312 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-202ENST00000535906 KCTD10Q9H3F6 313 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms