RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 YBX2Q9Y2T7 364 aaKnown RBP15.38■□□□□ 0.05
CAPN1-228ENST00000534373 UNC80Q8N2C7 3258 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 CCDC196A0A1B0GTZ2 297 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 C17orf102A2RUQ5 167 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 KIF28PB7ZC32 967 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
CAPN1-228ENST00000534373 SORBS3O60504 671 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 EFCAB14O75071 495 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 FOSP01100 380 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-228ENST00000534373 HSPA4P34932 840 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 FUT2Q10981 343 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 GPNMBQ14956 572 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 TRIM71Q2Q1W2 868 aaKnown RBP15.37■□□□□ 0.05
CAPN1-228ENST00000534373 CNKSR3Q6P9H4 555 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 HEATR3Q7Z4Q2 680 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 SERINC5Q86VE9 423 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 RAB11FIP4Q86YS3 637 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 BCAS3Q9H6U6 928 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 ZNF215Q9UL58 517 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-228ENST00000534373 PCDHA6Q9UN73 950 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 PCDHA8Q9Y5H6 950 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 UBIAD1Q9Y5Z9 338 aa15.37■□□□□ 0.05
CAPN1-228ENST00000534373 TRIP12Q14669 1992 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-228ENST00000534373 ABHD14A-ACY1A0A1B0GW23 586 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 hCG_1642624A0A1W2PR95 340 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 CAND2O75155 1236 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 REC8O95072 547 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 ITGB5P18084 799 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 RABGGTBP53611 331 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 FGD1P98174 961 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 PPP2R2DQ66LE6 453 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 ATP6V0A1Q93050 837 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 RNPEPQ9H4A4 650 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 RIC8AQ9NPQ8 531 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 JADE2Q9NQC1 790 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 V9GY48 417 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-228ENST00000534373 EMSYQ7Z589 1322 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 CNTNAP5Q8WYK1 1306 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 SCN5AQ14524 2016 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 EYSQ5T1H1 3165 aa15.36■□□□□ 0.05
CAPN1-228ENST00000534373 TANC1Q9C0D5 1861 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 KLF18A0A0U1RQI7 1052 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 NBNO60934 754 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 SMIM10L2AP0DMW4 78 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 SMIM10L2BP0DMW5 78 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 KCNA2P16389 499 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 PSMA5P28066 241 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 KCNJ6P48051 423 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 ZNF200P98182 395 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-228ENST00000534373 MTMR1Q13613 665 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 ZNF618Q5T7W0 954 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 WWC2Q6AWC2 1192 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 TRAF7Q6Q0C0 670 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 HERC6Q8IVU3 1022 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 SEPT1Q8WYJ6 367 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 TCEANC2Q96MN5 208 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 FAM217BQ9NTX9 383 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-228ENST00000534373 BARHL2Q9NY43 387 aa15.35■□□□□ 0.05
CAPN1-228ENST00000534373 GOLGA8AA7E2F4 631 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 RSPH10B2B2RC85 870 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 ATP9AO75110 1047 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 RSPH10BP0C881 870 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 NAPAP54920 295 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 IKBKEQ14164 716 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 HIC1Q14526 733 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 UBE2SQ16763 222 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 BLOC1S2Q6QNY1 142 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 SNX14Q9Y5W7 946 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 NRCAMQ92823 1304 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 TET1Q8NFU7 2136 aa15.34■□□□□ 0.05
CAPN1-228ENST00000534373 SMCO2A6NFE2 343 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 TREHO43280 583 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 MYOGP15173 224 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 TCF7P36402 384 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-228ENST00000534373 THPOP40225 353 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 METAP2P50579 478 aaKnown RBP eCLIP15.33■□□□□ 0.043e-8■■■■■ 34.2
CAPN1-228ENST00000534373 ADCY7P51828 1080 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 WDR5P61964 334 aaKnown RBP15.33■□□□□ 0.04
CAPN1-228ENST00000534373 ADAM17P78536 824 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 AP3B2Q13367 1082 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 MCTP2Q6DN12 878 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 WNT8BQ93098 351 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 JAKMIP1Q96N16 626 aaKnown RBP15.33■□□□□ 0.04
CAPN1-228ENST00000534373 MXRA8Q9BRK3 442 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 MYO9BQ13459 2157 aa15.33■□□□□ 0.04
CAPN1-228ENST00000534373 CHD9Q3L8U1 2897 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 STXBP3O00186 592 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 LGR5O75473 907 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 CA3P07451 260 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 POU3F3P20264 500 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-228ENST00000534373 CDC27P30260 824 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 ADD1P35611 737 aaKnown RBP15.32■□□□□ 0.04
CAPN1-228ENST00000534373 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 PFKFB3Q16875 520 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-228ENST00000534373 UTP14CQ5TAP6 766 aaKnown RBP15.32■□□□□ 0.04
CAPN1-228ENST00000534373 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 Q6ZUG5 572 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms