RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
TM9SF1-208ENST00000529332 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
TM9SF1-208ENST00000529332 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
TM9SF1-208ENST00000529332 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
TM9SF1-208ENST00000529332 GRIN3BO60391 1043 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 DDNO94850 711 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 TUBBP07437 444 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 PLEKP08567 350 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 USP14P54578 494 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 ZNF543Q08ER8 600 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 ORC2Q13416 577 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 CALCRLQ16602 461 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 CCDC96Q2M329 555 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 SHROOM1Q2M3G4 852 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 ANGEL2Q5VTE6 544 aaKnown RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 DPY19L2Q6NUT2 758 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 SV2BQ7L1I2 683 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 MIGA2Q7L4E1 593 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 CDAN1Q8IWY9 1227 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 TXLNBQ8N3L3 684 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 COA7Q96BR5 231 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 TEPSINQ96N21 525 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 GBP3Q9H0R5 595 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 ADARB2Q9NS39 739 aaKnown RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 LRWD1Q9UFC0 647 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 PPP2R3BQ9Y5P8 575 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 ASTN2O75129 1339 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 ZC3H4Q9UPT8 1303 aaKnown RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 LRRIQ3A6PVS8 624 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 EPHB6O15197 1021 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 TDP2O95551 362 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 EPS15P42566 896 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 CDK17Q00537 523 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 DCAF15Q66K64 600 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 EHBP1Q8NDI1 1231 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 GMCL1P1Q8NEA9 526 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 EXOC4Q96A65 974 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 CAPZA3Q96KX2 299 aa17.5■□□□□ 0.39
TM9SF1-208ENST00000529332 CAP2P40123 477 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 FXR2P51116 673 aaKnown RBP eCLIP17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 GPS2Q13227 327 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 RRP1BQ14684 758 aaKnown RBP17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 FKBP15Q5T1M5 1219 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 UNC13DQ70J99 1090 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 DYMQ7RTS9 669 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 KRT26Q7Z3Y9 468 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 NUDT12Q9BQG2 462 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 SH2D4AQ9H788 454 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 GINM1Q9NU53 330 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 VPS18Q9P253 973 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 SIK3Q9Y2K2 1263 aa17.49■□□□□ 0.39
TM9SF1-208ENST00000529332 POTEMA6NI47 508 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 ASNSP08243 561 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 VWA3BQ502W6 1294 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 GPCPD1Q9NPB8 672 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 PSD3Q9NYI0 1048 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 STK17AQ9UEE5 414 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 PITPNM2Q9BZ72 1349 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 MACROD2A1Z1Q3 448 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 PDE2AO00408 941 aaPredicted RBP17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 ZNF185O15231 689 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 RAD21O60216 631 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 EIF3JO75822 258 aaKnown RBP17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 IPO7O95373 1038 aaKnown RBP17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 SLC1A4P43007 532 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 ADCY7P51828 1080 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 VAV2P52735 878 aa17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 LARP4BQ92615 738 aaKnown RBP17.48■□□□□ 0.39
TM9SF1-208ENST00000529332 PVALEFA0A1B0GWK0 134 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 HNRNPH3P31942 346 aaKnown RBP17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 JAG1P78504 1218 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 KCNK18Q7Z418 384 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 SIAH1Q8IUQ4 282 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 GMCL1Q96IK5 515 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 NDST4Q9H3R1 872 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 ARHGAP20Q9P2F6 1191 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 PLAGL2Q9UPG8 496 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 FAN1Q9Y2M0 1017 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 GLIS3Q8NEA6 775 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 RAD54LQ92698 747 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 CCDC42Q96M95 316 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 FAM207AQ9NSI2 230 aaPredicted RBP17.47■□□□□ 0.39
TM9SF1-208ENST00000529332 DOCK1Q14185 1865 aa17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 ANO9A1A5B4 782 aa17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 F5H6K3 240 aa17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 LMAN1P49257 510 aa17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 KLRC3Q07444 240 aa17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 KIF5AQ12840 1032 aa17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 GUF1Q8N442 669 aaKnown RBP17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 CDK5RAP3Q96JB5 506 aa17.46■□□□□ 0.39
TM9SF1-208ENST00000529332 IDEP14735 1019 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms