RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CETN1Q12798 172 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 ELOAQ14241 798 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 WSCD2Q2TBF2 565 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 SKOR2Q2VWA4 1001 aaPredicted RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 SLFNL1Q499Z3 407 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 OTUD7BQ6GQQ9 843 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 TATDN1Q6P1N9 297 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 KRT26Q7Z3Y9 468 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 DGKHQ86XP1 1220 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 HOMER1Q86YM7 354 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 LRRC47Q8N1G4 583 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 ZNF540Q8NDQ6 660 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 OR8K1Q8NGG5 319 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 FBXO30Q8TB52 745 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 CACTINQ8WUQ7 758 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 COL26A1Q96A83 441 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 ARL5BQ96KC2 179 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 SNX27Q96L92 541 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 TSG101Q99816 390 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 ELAC2Q9BQ52 826 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 ISCA1Q9BUE6 129 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 CARD11Q9BXL7 1154 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 TEX13BQ9BXU2 312 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 GLT8D2Q9H1C3 349 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 VPS11Q9H270 941 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 PLCB1Q9NQ66 1216 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 SIRT5Q9NXA8 310 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 MIS18AQ9NYP9 233 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 PPARGC1AQ9UBK2 798 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 TIMM22Q9Y584 194 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 MYO3BQ8WXR4 1341 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 KIAA1107Q9UPP5 1409 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 ANO9A1A5B4 782 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 CCDC169A6NNP5 214 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 SGK1O00141 431 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 CHUKO15111 745 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 NDUFB5O43674 189 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 USP2O75604 605 aaPredicted RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 GNRH1P01148 92 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 PENKP01210 267 aaPredicted RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 KRT1P04264 644 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 FGRP09769 529 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 C6orf222P0C671 652 aaPredicted RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 PCNAP12004 261 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 TRIM27P14373 513 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 RPS6KB1P23443 525 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 CETN2P41208 172 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 ATP5OP48047 213 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 MAPKAPK2P49137 400 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 PLTPP55058 493 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 MLLT1Q03111 559 aaPredicted RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 PPP2R5DQ14738 602 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 MLC1Q15049 377 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 CCNG2Q16589 344 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 GFOD2Q3B7J2 385 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 TKFCQ3LXA3 575 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 CFAP157Q5JU67 520 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 NDUFAF5Q5TEU4 345 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 CCDC62Q6P9F0 684 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 TUBA3EQ6PEY2 450 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 LRRC31Q6UY01 552 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 Q6ZNB5 142 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 PLEKHM3Q6ZWE6 761 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 TMC4Q7Z404 712 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 TADA2BQ86TJ2 420 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 SLC9B2Q86UD5 537 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 CAND1Q86VP6 1230 aaKnown RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 CAMKK1Q8N5S9 505 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 ZNF397Q8NF99 534 aaPredicted RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 TOR1AIP2Q8NFQ8 470 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 STON2Q8WXE9 905 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 SMARCE1Q969G3 411 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 ALKBH8Q96BT7 664 aaKnown RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 GMCL1Q96IK5 515 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 PURBQ96QR8 312 aaKnown RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 FNBP1Q96RU3 617 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 STRBPQ96SI9 672 aaKnown RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 GORASP1Q9BQQ3 440 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 LSM14BQ9BX40 385 aaKnown RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 OXCT2Q9BYC2 517 aaPredicted RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 ACAD9Q9H845 621 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 POLMQ9NP87 494 aaPredicted RBP7.16□□□□□ -1.26
SDC2-208ENST00000523877 ABCF3Q9NUQ8 709 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 NDFIP2Q9NV92 336 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 SAGE1Q9NXZ1 904 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 GTF2IRD1Q9UHL9 959 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 NCOA3Q9Y6Q9 1424 aa7.16□□□□□ -1.26
SDC2-208ENST00000523877 OR6C65A6NJZ3 312 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 EIF3CLB5ME19 914 aaKnown RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 CACNB4O00305 520 aaPredicted RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 APOL1O14791 398 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 TLR3O15455 904 aaKnown RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 ASAP2O43150 1006 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 TMCC1O94876 653 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 MYCP01106 439 aaPredicted RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 NPPAP01160 153 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 MT-ND3P03897 115 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 UBL4AP11441 157 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 ALAS1P13196 640 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms