RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 AMPD2Q01433 879 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 FAPQ12884 760 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 HLTFQ14527 1009 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 UVSSAQ2YD98 709 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 YOD1Q5VVQ6 348 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 AMIGO3Q86WK7 504 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 KIF18BQ86Y91 864 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZNF513Q8N8E2 541 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 DNAJB8Q8NHS0 232 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 NEDD1Q8NHV4 660 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 PPP1R13LQ8WUF5 828 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 CLUHP3Q96NS8 147 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZFYVE21Q9BQ24 234 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 NKX2-4Q9H2Z4 354 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 CYP26B1Q9NR63 512 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 SPEF1Q9Y4P9 236 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ACTL7BQ9Y614 415 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ANKRD36BQ8N2N9 1353 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 C4AP0C0L4 1744 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 AKAP11Q9UKA4 1901 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 H0YGN5 161 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZEB2O60315 1214 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 SLIT3O75094 1523 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ALDH1L1O75891 902 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 SCG5P05408 212 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 CELA2BP08218 269 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 KCNJ6P48051 423 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 BRCA2P51587 3418 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 GFRA1P56159 465 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 POU4F1Q01851 419 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 SART3Q15020 963 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 PKN2Q16513 984 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 CCSAPQ6IQ19 270 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 LYPD4Q6UWN0 246 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ADGRF5Q8IZF2 1346 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 C2CD4AQ8NCU7 369 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 OR2W6PQ8NHA6 318 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 WDR66Q8TBY9 1149 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 XAGE3Q8WTP9 111 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 LEO1Q8WVC0 666 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 VWCEQ96DN2 955 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 TTC1Q99614 292 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 MIPEPQ99797 713 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 PUS7LQ9H0K6 701 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ACSS3Q9H6R3 686 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 TRIM39Q9HCM9 518 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 FAM105AQ9NUU6 356 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 DICER1Q9UPY3 1922 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 PRC1O43663 620 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 KCNH1O95259 989 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 RASGRP1O95267 797 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 SNRPB2P08579 225 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 POU3F3P20264 500 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 KIR3DL1P43629 444 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 TMF1P82094 1093 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 NRG1Q02297 640 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 CWF19L1Q69YN2 538 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 GTF2IRD2BQ6EKJ0 949 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 RSPO2Q6UXX9 243 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 BRAPQ7Z569 592 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 DDX53Q86TM3 631 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 GTF2IRD2Q86UP8 949 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 SPATS2Q86XZ4 545 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 FIBCD1Q8N539 461 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 ENOX1Q8TC92 643 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 BTN2A2Q8WVV5 523 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 USP7Q93009 1102 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZNF512BQ96KM6 892 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 NACC1Q96RE7 527 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 HACL1Q9UJ83 578 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 MKL2Q9ULH7 1088 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 ADAMTS8Q9UP79 889 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 CPSF1Q10570 1443 aaKnown RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ACEP12821 1306 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 SHOXO15266 292 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 DLX3O60479 287 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 DNAJC8O75937 253 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 WISP1O95388 367 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 EYA4O95677 639 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 C6orf222P0C671 652 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 DRD2P14416 443 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 SDSP20132 328 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 EPHX2P34913 555 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 NOP2P46087 812 aaKnown RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 SCNN1BP51168 640 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZNF445P59923 1031 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 OCRLQ01968 901 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 CFAP100Q494V2 611 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 STYK1Q6J9G0 422 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 PNMA8AQ86V59 439 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 UBR7Q8N806 425 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ADCY4Q8NFM4 1077 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ORAI3Q9BRQ5 295 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 NOL6Q9H6R4 1146 aaKnown RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 IFT22Q9H7X7 185 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 AKTIPQ9H8T0 292 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms