RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 LIMS1P48059 325 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 FOXO4P98177 505 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 UBE2R2Q712K3 238 aaPredicted RBP7.79□□□□□ -1.16
CHD1-209ENST00000512844 B3GNT8Q7Z7M8 397 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 MIB1Q86YT6 1006 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 SMARCC2Q8TAQ2 1214 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 UHMK1Q8TAS1 419 aaKnown RBP7.79□□□□□ -1.16
CHD1-209ENST00000512844 FEZ1Q99689 392 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 GOLGA2P5Q9HBQ8 144 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 DTLQ9NZJ0 730 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 ASH2LQ9UBL3 628 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 PMF1-BGLAPU3KQ54 211 aa7.79□□□□□ -1.16
CHD1-209ENST00000512844 TCRBV16S1A1N1A0A5B0 115 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 IRS4O14654 1257 aaPredicted RBP7.78□□□□□ -1.16
CHD1-209ENST00000512844 WNT9AO14904 365 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 IGSF3O75054 1194 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 ASLP04424 464 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 MC3RP41968 323 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 PABPC4Q13310 644 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHD1-209ENST00000512844 TUSC3Q13454 348 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 ARHGAP36Q6ZRI8 547 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.78□□□□□ -1.16
CHD1-209ENST00000512844 CISD2Q8N5K1 135 aaKnown RBP7.78□□□□□ -1.16
CHD1-209ENST00000512844 ARRDC4Q8NCT1 418 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 PWWP2AQ96N64 755 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 TRIM39Q9HCM9 518 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 CD2APQ9Y5K6 639 aa7.78□□□□□ -1.16
CHD1-209ENST00000512844 NKRFO15226 690 aaKnown RBP eCLIP7.77□□□□□ -1.17
CHD1-209ENST00000512844 RFPL3O75679 317 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 KRT1P04264 644 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 PDE6AP16499 860 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 FBLN1P23142 703 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 STAT5AP42229 794 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 SSPNQ14714 243 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 TCERG1LQ5VWI1 586 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 KCTD1Q719H9 257 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 LRRC56Q8IYG6 542 aaPredicted RBP7.77□□□□□ -1.17
CHD1-209ENST00000512844 CELF4Q9BZC1 486 aaKnown RBP7.77□□□□□ -1.17
CHD1-209ENST00000512844 IRF2BPLQ9H1B7 796 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 MAGEC2Q9UBF1 373 aaPredicted RBP7.77□□□□□ -1.17
CHD1-209ENST00000512844 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 PLAAQ9Y263 795 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 COQ6Q9Y2Z9 468 aa7.77□□□□□ -1.17
CHD1-209ENST00000512844 SMARCA5O60264 1052 aaPredicted RBP7.76□□□□□ -1.17
CHD1-209ENST00000512844 ATF2P15336 505 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 IGFBP6P24592 240 aaPredicted RBP7.76□□□□□ -1.17
CHD1-209ENST00000512844 AFF3P51826 1226 aaKnown RBP7.76□□□□□ -1.17
CHD1-209ENST00000512844 GRIN1Q05586 938 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 FIGNQ5HY92 759 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 FGD2Q7Z6J4 655 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 FAM129CQ86XR2 697 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 IGSF22Q8N9C0 903 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 TTLL11Q8NHH1 800 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 SCLYQ96I15 445 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 CABP5Q9NP86 173 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 TBX22Q9Y458 520 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 ATP23Q9Y6H3 246 aa7.76□□□□□ -1.17
CHD1-209ENST00000512844 ENPP3O14638 875 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 HIP1RO75146 1068 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 GJA4P35212 333 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 HABP4Q5JVS0 413 aaKnown RBP7.75□□□□□ -1.17
CHD1-209ENST00000512844 GIMAP6Q6P9H5 292 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 OSTM1Q86WC4 334 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 C2orf69Q8N8R5 385 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 CLUHP3Q96NS8 147 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 CD244Q9BZW8 370 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 INTS7Q9NVH2 962 aaKnown RBP7.75□□□□□ -1.17
CHD1-209ENST00000512844 RIC8BQ9NVN3 520 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 CBLCQ9ULV8 474 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 SRPK3Q9UPE1 567 aa7.75□□□□□ -1.17
CHD1-209ENST00000512844 C8BP07358 591 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 BTBD8Q5XKL5 378 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 SDE2Q6IQ49 451 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 ZCCHC8Q6NZY4 707 aaKnown RBP7.74□□□□□ -1.17
CHD1-209ENST00000512844 TTLL7Q6ZT98 887 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 PTRH1Q86Y79 214 aaKnown RBP7.74□□□□□ -1.17
CHD1-209ENST00000512844 NIM1KQ8IY84 436 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 TTLL6Q8N841 843 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 ZBTB8AQ96BR9 441 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 WRNIP1Q96S55 665 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 SAMD15Q9P1V8 674 aa7.74□□□□□ -1.17
CHD1-209ENST00000512844 TNPO3Q9Y5L0 923 aaKnown RBP7.74□□□□□ -1.17
CHD1-209ENST00000512844 CYP7B1O75881 506 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 HSD3B2P26439 372 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 NEK4P51957 841 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 JAM2P57087 298 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 CFAP100Q494V2 611 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 PAN2Q504Q3 1202 aaKnown RBP7.73□□□□□ -1.17
CHD1-209ENST00000512844 TMEM177Q53S58 311 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 VASNQ6EMK4 673 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 RBM12BQ8IXT5 1001 aaKnown RBP7.73□□□□□ -1.17
CHD1-209ENST00000512844 TMEFF1Q8IYR6 380 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 FAM26EQ8N5C1 309 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 NINJ1Q92982 152 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 CLIC6Q96NY7 704 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 TMEM209Q96SK2 561 aa7.73□□□□□ -1.17
CHD1-209ENST00000512844 SLC12A8A0AV02 714 aa7.72□□□□□ -1.17
CHD1-209ENST00000512844 DNAJC8O75937 253 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms