RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RMDN3Q96TC7 470 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 PRO3102Q9H379 93 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 ABHD16BQ9H3Z7 469 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 C11orf49Q9H6J7 331 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 VTA1Q9NP79 307 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 RBM28Q9NW13 759 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 BARHL2Q9NY43 387 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 ASB14A6NK59 587 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 SORBS3O60504 671 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 PFKFB2O60825 505 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 DUSP11O75319 330 aaKnown RBP8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 NR3C2P08235 984 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 SCG2P13521 617 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 UBA1P22314 1058 aaKnown RBP8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 ITGB8P26012 769 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 PSMA5P28066 241 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 GNAQP50148 359 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 SP2Q02086 613 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 TRIM60Q495X7 471 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 PPP1R18Q6NYC8 613 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 GTF3C6Q969F1 213 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 FERMT2Q96AC1 680 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 TBC1D32Q96NH3 1257 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 CTAGE1Q96RT6 745 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 MTRQ99707 1265 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 LZTS2Q9BRK4 669 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 SLC26A6Q9BXS9 759 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 SLC5A4Q9NY91 659 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 VPS54Q9P1Q0 977 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 NAP1L2Q9ULW6 460 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 CNPY2Q9Y2B0 182 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 TANC1Q9C0D5 1861 aa8.3□□□□□ -1.08
TOPBP1-207ENST00000509162 LOC102724159A0A0B4J2E5 919 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 H0YGN5 161 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 GCOM1H8Y6P7 765 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 M0R2N6 131 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 WNT7AO00755 349 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 PRPF3O43395 683 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 MSCO60682 206 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 POLR2MP0CAP2 368 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 RARBP10826 455 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 ITGB5P18084 799 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 PSMC6P62333 389 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 TNFAIP2Q03169 654 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 PWP2Q15269 919 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 LY6KQ17RY6 165 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 DUSP28Q4G0W2 176 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 EARS2Q5JPH6 523 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 VSIG10LQ86VR7 867 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 MCF2L2Q86YR7 1114 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 C7orf61Q8IZ16 206 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 NSUN7Q8NE18 718 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 CYP2W1Q8TAV3 490 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 VWCEQ96DN2 955 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 CCDC97Q96F63 343 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 ZNF274Q96GC6 653 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 INPP4AQ96PE3 977 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 PRR14Q9BWN1 585 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 RNF26Q9BY78 433 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 ADD3Q9UEY8 706 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 PNMA2Q9UL42 364 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 FAM184BQ9ULE4 1060 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 SIP14410 1827 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 STK36Q9NRP7 1315 aa8.29□□□□□ -1.08
TOPBP1-207ENST00000509162 CHD9Q3L8U1 2897 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 IGLV3-22A0A075B6J6 115 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 ESYT2A0FGR8 921 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 LILRB3O75022 631 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 ATP9AO75110 1047 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 ASGR1P07306 291 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 HOXD8P13378 290 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 ACLYP53396 1101 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 NAPAP54920 295 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 RTP1P59025 263 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 KCNA10Q16322 511 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 ARHGEF16Q5VV41 709 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 CXCL17Q6UXB2 119 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 SEPT14Q6ZU15 432 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 NECAB2Q7Z6G3 386 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 NSUN6Q8TEA1 469 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 KAT2BQ92831 832 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 LENG9Q96B70 501 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 ANO3Q9BYT9 981 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 C22orf23Q9BZE7 217 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 WDR11Q9BZH6 1224 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 SENP6Q9GZR1 1112 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 MAF1Q9H063 256 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 TMEM134Q9H6X4 195 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 RIC8AQ9NPQ8 531 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 SEC63Q9UGP8 760 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms