RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 RAD54LQ92698 747 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 FAM20AQ96MK3 541 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 TUBGCP2Q9BSJ2 902 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 KIAA1683Q9H0B3 1180 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 TAF1DQ9H5J8 278 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 CAPN11Q9UMQ6 739 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 MRPL11Q9Y3B7 192 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ASTN2O75129 1339 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ABCB11O95342 1321 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ATAD5Q96QE3 1844 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 MTIF2P46199 727 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 SNAP25P60880 206 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 EAPPQ56P03 285 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 TEX35Q5T0J7 233 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 FKBP15Q5T1M5 1219 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 UNC13DQ70J99 1090 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ACRBPQ8NEB7 543 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ETNPPLQ8TBG4 499 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 CNOT6LQ96LI5 555 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 FAM53CQ9NYF3 392 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 CDC23Q9UJX2 597 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 SCAF8Q9UPN6 1271 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 TTC26A0AVF1 554 aa12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 NDUFA10O95299 355 aa12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 TRIM21P19474 475 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 LENG9Q96B70 501 aa12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 NMRK2Q9NPI5 230 aa12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 EPN1Q9Y6I3 576 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-203ENST00000508736 GCOM1H8Y6P7 765 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 POLR2MP0CAP2 368 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 KRT83P78385 493 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 GHRHRQ02643 423 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 SPIRE1Q08AE8 756 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 STK4Q13043 487 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 PSMD2Q13200 908 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 HAUS3Q68CZ6 603 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 FOXR2Q6PJQ5 311 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 USP50Q70EL3 339 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 PRPF38AQ8NAV1 312 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 NUDT12Q9BQG2 462 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 ZNF341Q9BYN7 854 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 ZNF446Q9NWS9 450 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 ZNF112Q9UJU3 913 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
PRPF40B-203ENST00000508736 B4DLN1 442 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 ICAM1P05362 532 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 USP14P54578 494 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 TBC1D8BQ0IIM8 1120 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 FIGNQ5HY92 759 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 ANGEL2Q5VTE6 544 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 ANKRD40Q6AI12 368 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 PCMTD1Q96MG8 357 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 NOC4LQ9BVI4 516 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 IRX2Q9BZI1 471 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 ZMYND15Q9H091 742 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 HAUS4Q9H6D7 363 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 PPP2R3BQ9Y5P8 575 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 MYMKA6NI61 221 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 FDX1P10109 184 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 ZBED6P86452 979 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 EHHADHQ08426 723 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 MCM6Q14566 821 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 PRR16Q569H4 304 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 GUF1Q8N442 669 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 ERMNQ8TAM6 284 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 TSG101Q99816 390 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 WDR18Q9BV38 432 aa12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 MAP3K20Q9NYL2 800 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-203ENST00000508736 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms