RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 DVL3Q92997 716 aaPredicted RBP6.32□□□□□ -1.4
SUB1-204ENST00000504016 SSBP3Q9BWW4 388 aaPredicted RBP6.32□□□□□ -1.4
SUB1-204ENST00000504016 EPB41L1Q9H4G0 881 aa6.32□□□□□ -1.4
SUB1-204ENST00000504016 MYOTQ9UBF9 498 aa6.32□□□□□ -1.4
SUB1-204ENST00000504016 NPEPPSL1A6NEC2 478 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 AGRPO00253 132 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 MAFKO60675 156 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 LRG1P02750 347 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 RAB33AQ14088 237 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
SUB1-204ENST00000504016 EEPD1Q7L9B9 569 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 YTHDC1Q96MU7 727 aaKnown RBP6.31□□□□□ -1.4
SUB1-204ENST00000504016 WRNIP1Q96S55 665 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 TMEM209Q96SK2 561 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 SMOC1Q9H4F8 434 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 JADE2Q9NQC1 790 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 PPP4R1LQ9P1A2 415 aa6.31□□□□□ -1.4
SUB1-204ENST00000504016 KRIT1O00522 736 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 U2SURPO15042 1029 aaKnown RBP6.3□□□□□ -1.4
SUB1-204ENST00000504016 DDR2Q16832 855 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 SLC35F1Q5T1Q4 408 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 TMC5Q6UXY8 1006 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 PHOSPHO1Q8TCT1 267 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 KCTD13Q8WZ19 329 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 KISS1RQ969F8 398 aaPredicted RBP6.3□□□□□ -1.4
SUB1-204ENST00000504016 C1orf159Q96HA4 380 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 FTSJ1Q9UET6 329 aa6.3□□□□□ -1.4
SUB1-204ENST00000504016 AKAP8O43823 692 aaKnown RBP6.29□□□□□ -1.4
SUB1-204ENST00000504016 GRIA2P42262 883 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 PPP2CBP62714 309 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 PPP2CAP67775 309 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 TRMT10BQ6PF06 316 aaKnown RBP6.29□□□□□ -1.4
SUB1-204ENST00000504016 ARHGEF18Q6ZSZ5 1173 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 KBTBD2Q8IY47 623 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 MBD6Q96DN6 1003 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 DRC1Q96MC2 740 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 EPN3Q9H201 632 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 ZDHHC9Q9Y397 364 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 NPFFR2Q9Y5X5 522 aa6.29□□□□□ -1.4
SUB1-204ENST00000504016 B4GALT4O60513 344 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 FSHBP01225 129 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 RANGAP1P46060 587 aaPredicted RBP6.28□□□□□ -1.4
SUB1-204ENST00000504016 PPP2R2AP63151 447 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 TRIM48Q8IWZ4 208 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 IGDCC4Q8TDY8 1250 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 SH3RF3Q8TEJ3 882 aaPredicted RBP6.28□□□□□ -1.4
SUB1-204ENST00000504016 ZCCHC14Q8WYQ9 949 aaKnown RBP6.28□□□□□ -1.4
SUB1-204ENST00000504016 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 BARX1Q9HBU1 254 aaPredicted RBP6.28□□□□□ -1.4
SUB1-204ENST00000504016 USP35Q9P2H5 1018 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 ASH2LQ9UBL3 628 aa6.28□□□□□ -1.4
SUB1-204ENST00000504016 MAP4K2Q12851 820 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 NFATC3Q12968 1075 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 ICAM4Q14773 271 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 SLC10A6Q3KNW5 377 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 PKN3Q6P5Z2 889 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 CIR1Q86X95 450 aaPredicted RBP6.27□□□□□ -1.41
SUB1-204ENST00000504016 KLHL36Q8N4N3 616 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 PIP4K2CQ8TBX8 421 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 IER2Q9BTL4 223 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 HIRIP3Q9BW71 556 aaPredicted RBP6.27□□□□□ -1.41
SUB1-204ENST00000504016 SLC6A20Q9NP91 592 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 GPR27Q9NS67 375 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 RBPJLQ9UBG7 517 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 SRRDQ9UH36 339 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 WASF3Q9UPY6 502 aa6.27□□□□□ -1.41
SUB1-204ENST00000504016 A0A1W2PQU0 124 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 SLC27A2O14975 620 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 CAPNS1P04632 268 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 GRIN1Q05586 938 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 RBL2Q08999 1139 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 VASNQ6EMK4 673 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 CYP4F22Q6NT55 531 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 USP53Q70EK8 1073 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 SPRED1Q7Z699 444 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 CDK5RAP1Q96SZ6 601 aaKnown RBP6.26□□□□□ -1.41
SUB1-204ENST00000504016 CDIP1Q9H305 208 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 DEF6Q9H4E7 631 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 PFDN2Q9UHV9 154 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 TSC22D4Q9Y3Q8 395 aa6.26□□□□□ -1.41
SUB1-204ENST00000504016 GPR42O15529 346 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 MSCO60682 206 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 EPHB4P54760 987 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 SLC16A11Q8NCK7 471 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 CLEC4DQ8WXI8 215 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 PHF20Q9BVI0 1012 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 KLC2Q9H0B6 622 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 HSPBP1Q9NZL4 362 aa6.25□□□□□ -1.41
SUB1-204ENST00000504016 PPARGC1AQ9UBK2 798 aaKnown RBP6.25□□□□□ -1.41
SUB1-204ENST00000504016 FAM221BA6H8Z2 402 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 DLX3O60479 287 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 FBXO21O94952 628 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 HSP90AA2PQ14568 343 aaPredicted RBP6.24□□□□□ -1.41
SUB1-204ENST00000504016 PHF19Q5T6S3 580 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 ZNF585AQ6P3V2 769 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 RSPO2Q6UXX9 243 aaPredicted RBP6.24□□□□□ -1.41
SUB1-204ENST00000504016 SPATC1Q76KD6 591 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 RBM12BQ8IXT5 1001 aaKnown RBP6.24□□□□□ -1.41
SUB1-204ENST00000504016 TTLL11Q8NHH1 800 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 PTPN18Q99952 460 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms