RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 SSC5DA1L4H1 1573 aa23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 SETQ01105 290 aaPredicted RBP23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 PTPN14Q15678 1187 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 LRCH2Q5VUJ6 765 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 CREBRFQ8IUR6 639 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 FAM114A1Q8IWE2 563 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 CCDC65Q8IXS2 484 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 KLRG1Q96E93 195 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 PICK1Q9NRD5 415 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 MAP3K20Q9NYL2 800 aaKnown RBP23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 MFAP3LO75121 409 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 FDX1P10109 184 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 UBXN1Q04323 297 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 FAM26FQ5R3K3 315 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 CPXCR1Q8N123 301 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 SAMD3Q8N6K7 520 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 GLIS3Q8NEA6 775 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 MYRIPQ8NFW9 859 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 C12orf42Q96LP6 360 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 HSD17B14Q9BPX1 270 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 PNMA2Q9UL42 364 aa23.76■■□□□ 1.39
UBE2D3-216ENST00000503742 RLFQ13129 1914 aa23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 A0A1W2PQC6 194 aa23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 PRKCSHP14314 528 aaPredicted RBP23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 LRRC63Q05C16 580 aa23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 MB21D1Q8N884 522 aa23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 CNOT6LQ96LI5 555 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 TUBGCP2Q9BSJ2 902 aa23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 FZD1Q9UP38 647 aa23.75■■□□□ 1.39
UBE2D3-216ENST00000503742 NPHP3-ACAD11A0A0J9YXS1 232 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 ALAS1P13196 640 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 MUM1L1Q5H9M0 696 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 MYOCDQ8IZQ8 938 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 MXRA8Q9BRK3 442 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 TUFT1Q9NNX1 390 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 POLR2AP24928 1970 aaKnown RBP23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 UQCRHLA0A096LP55 91 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 CCP110O43303 1012 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 UQCRHP07919 91 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 ARP10275 920 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 CASP14P31944 242 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 FXR1P51114 621 aaKnown RBP eCLIP23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 TRIM14Q14142 442 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 LRRC41Q15345 812 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 B3GNT9Q6UX72 402 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 CCDC51Q96ER9 411 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 FRMPD4Q14CM0 1322 aa23.74■■□□□ 1.39
UBE2D3-216ENST00000503742 VWA5AO00534 786 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 ZBED4O75132 1171 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 FECHP22830 423 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 PABPC4Q13310 644 aaKnown RBP eCLIP23.73■■□□□ 1.394e-7■■■■□ 24.1
UBE2D3-216ENST00000503742 ZCWPW2Q504Y3 356 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 NOL9Q5SY16 702 aaKnown RBP23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 SLC30A10Q6XR72 485 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 CNGA4Q8IV77 575 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 SYTL5Q8TDW5 730 aaPredicted RBP23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 NAA15Q9BXJ9 866 aaKnown RBP23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 FHDC1Q9C0D6 1143 aaPredicted RBP23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 RGL1Q9NZL6 768 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 ZHX2Q9Y6X8 837 aa23.73■■□□□ 1.39
UBE2D3-216ENST00000503742 C19orf81C9J6K1 198 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 BCRP11274 1271 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 DNM2P50570 870 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 CYP4A11Q02928 519 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 GIT2Q14161 759 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 CPLX3Q8WVH0 158 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 EEF2KMTQ96G04 330 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 ZNF577Q9BSK1 485 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 FGFBP2Q9BYJ0 223 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 KIF2AO00139 706 aaPredicted RBP23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 GAS7O60861 476 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 SLITRK3O94933 977 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 EYA4O95677 639 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 ITGB5P18084 799 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 NIPA1Q7RTP0 329 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 KRT26Q7Z3Y9 468 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 ATG4CQ96DT6 458 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 ZFP91Q96JP5 570 aaPredicted RBP23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 WDR11Q9BZH6 1224 aa23.72■■□□□ 1.39
UBE2D3-216ENST00000503742 TPM1P09493 284 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 MUTP22033 750 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 CACNB1Q02641 598 aaPredicted RBP23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 SUPT20HL1Q3ZLR7 823 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 HERC4Q5GLZ8 1057 aaPredicted RBP23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 MIIPQ5JXC2 388 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 LRRC55Q6ZSA7 311 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 REXO1L1PQ8IX06 675 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 IL31RAQ8NI17 732 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 PAXBP1Q9Y5B6 917 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 FGFR1OPO95684 399 aaKnown RBP23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 HSP90AA2PQ14568 343 aaPredicted RBP23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 REPS2Q8NFH8 660 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 WNK4Q96J92 1243 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 RIT2Q99578 217 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 ADAMTS5Q9UNA0 930 aa23.71■■□□□ 1.39
UBE2D3-216ENST00000503742 B4DLN1 442 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 RNF225M0QZC1 329 aaPredicted RBP23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 IPO5O00410 1097 aaKnown RBP23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 DDNO94850 711 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms